RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 FADS2P1A8MWK0 482 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 CDK2AP1O14519 115 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 CFLARO15519 480 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 RFPL2O75678 378 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 PRKCGP05129 697 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 TCF4P15884 667 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 ITIH1P19827 911 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 MX2P20592 715 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 FGFR3P22607 806 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 S100A5P33763 92 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 MSX2P35548 267 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 NUDT1P36639 197 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 NAMPTP43490 491 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 CLK3P49761 638 aaKnown RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 RAD23AP54725 363 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 HADHQ16836 314 aaKnown RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 SLC9A4Q6AI14 798 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 CCSAPQ6IQ19 270 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 DNAJC24Q6P3W2 148 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 TMC5Q6UXY8 1006 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 SPRED1Q7Z699 444 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 FKBP10Q96AY3 582 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 RTP4Q96DX8 246 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 CEP295NLQ96MC4 621 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 OR52B2Q96RD2 323 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 CSF3RQ99062 836 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 ZNF518BQ9C0D4 1074 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 PCDH12Q9NPG4 1184 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 CYP26B1Q9NR63 512 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 TOPORSQ9NS56 1045 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-221ENST00000638141 HOXC10Q9NYD6 342 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 UGT2A1Q9Y4X1 527 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 PCDHAC2Q9Y5I4 1007 aa12.19□□□□□ -0.46
CAPN3-221ENST00000638141 NRXN2Q9P2S2 1712 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 B8ZZF3 427 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 CST8O60676 142 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 LYPLA2O95372 231 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 CKMT2P17540 419 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 ACO1P21399 889 aaKnown RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 PKLRP30613 574 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 CAPGP40121 348 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 NR4A2P43354 598 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 MAGEA3P43357 314 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 SLC26A2P50443 739 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 EIF2B5Q13144 721 aaKnown RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 NEDD8Q15843 81 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 ATP6AP1Q15904 470 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 SHROOM1Q2M3G4 852 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 CCNJQ5T5M9 372 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 MROH9Q5TGP6 573 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 BROXQ5VW32 411 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 TXNRD3Q86VQ6 643 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 MAP4K3Q8IVH8 894 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 CLIP4Q8N3C7 705 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 SFRP1Q8N474 314 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 Q8N9G6 341 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 MAPK15Q8TD08 544 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 VPS33AQ96AX1 596 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 LXNQ9BS40 222 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 TEKT3Q9BXF9 490 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 EMILIN2Q9BXX0 1053 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 MTRRQ9UBK8 725 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 CNTNAP2Q9UHC6 1331 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 TESPA1A2RU30 521 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 TCAF2A6NFQ2 919 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 PHGDHO43175 533 aaKnown RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 UGT2B11O75310 529 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 CDH1P12830 882 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 GARTP22102 1010 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 TBXAS1P24557 533 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 GSTM2P28161 218 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 GNA15P30679 374 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 ARCN1P48444 511 aaKnown RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 PSME3P61289 254 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 CLDN10P78369 228 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 ROR1Q01973 937 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 DNASE1L3Q13609 305 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 C15orf59Q2T9L4 293 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 BRDTQ58F21 947 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 UNC5AQ6ZN44 842 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 SLC22A16Q86VW1 577 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 SLC38A6Q8IZM9 456 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 SLC4A11Q8NBS3 891 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 SLC45A3Q96JT2 553 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 CDK5RAP1Q96SZ6 601 aaKnown RBP12.18□□□□□ -0.46
CAPN3-221ENST00000638141 RIT2Q99578 217 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 WDR18Q9BV38 432 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 NYAP2Q9P242 653 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 KCNN3Q9UGI6 736 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 PCDHGA7Q9Y5G6 932 aa12.18□□□□□ -0.46
CAPN3-221ENST00000638141 HEATR9A2RTY3 570 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 SLC15A5A6NIM6 579 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 SAC3D1A6NKF1 404 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 A6NL46 340 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 TISP43B9A030 160 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 SNPHO15079 494 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 HDAC3O15379 428 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 ABCB7O75027 752 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 GABBR2O75899 941 aa12.17□□□□□ -0.46
CAPN3-221ENST00000638141 RASAL1O95294 804 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms