RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	GRIA3	P42263	894 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	CYP24A1	Q07973	514 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SELPLG	Q14242	412 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	CBX2	Q14781	532 aa	Predicted RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SNX17	Q15036	470 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	NOMO1	Q15155	1222 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	HADH	Q16836	314 aa	Known RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	INAVA	Q3KP66	663 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	CCNYL2	Q5T2Q4	361 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	STEAP4	Q687X5	459 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	DARS2	Q6PI48	645 aa	Known RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	PIK3C3	Q8NEB9	887 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	DEPDC1B	Q8WUY9	529 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	USP13	Q92995	863 aa	Predicted RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	ISL2	Q96A47	359 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	EBNA1BP2	Q99848	306 aa	Known RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SH2D3A	Q9BRG2	576 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	AMN	Q9BXJ7	453 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	ZNF518B	Q9C0D4	1074 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	MARCH7	Q9H992	704 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	CNGB3	Q9NQW8	809 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	ITM2B	Q9Y287	266 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	TESMIN	Q9Y4I5	508 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	HTT	P42858	3142 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SSC5D	A1L4H1	1573 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	CROCC	Q5TZA2	2017 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	MKI67	P46013	3256 aa	Known RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	KPNA7	A9QM74	516 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	CSPG5	O95196	566 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	HSPA4L	O95757	839 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	KRT3	P12035	628 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	M6PR	P20645	277 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	CXCR2	P25025	360 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	EEF1D	P29692	281 aa	Known RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	EPHX2	P34913	555 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	ZNF76	P36508	570 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	BMPR1A	P36894	532 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	GRM5	P41594	1212 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	QARS	P47897	775 aa	Known RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	PRKAA2	P54646	552 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	CLDN10	P78369	228 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	MRPS9	P82933	396 aa	Known RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	TRIM32	Q13049	653 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	ARHGEF6	Q15052	776 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	AASDH	Q4L235	1098 aa	Predicted RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	WDR44	Q5JSH3	913 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	IQSEC1	Q6DN90	963 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	UGT3A1	Q6NUS8	523 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	PADI6	Q6TGC4	694 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	KIAA0408	Q6ZU52	694 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	ZNF781	Q8N8C0	355 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	ZSWIM2	Q8NEG5	633 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SLC7A14	Q8TBB6	771 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SUN5	Q8TC36	379 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	MAPK15	Q8TD08	544 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	GLT1D1	Q96MS3	346 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	NOL11	Q9H8H0	719 aa	Known RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	HEATR9	A2RTY3	570 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	TCAF2	A6NFQ2	919 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	VWA5A	O00534	786 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	ZBTB39	O15060	712 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	GNAO1	P09471	354 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SERPINB1	P30740	379 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	CAP2	P40123	477 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	STX1B	P61266	288 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	PSME3	P61289	254 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	OGDH	Q02218	1023 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	IK	Q13123	557 aa	Predicted RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	MTM1	Q13496	603 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	BRDT	Q58F21	947 aa	Predicted RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SLFN13	Q68D06	897 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SLC9A4	Q6AI14	798 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	DCUN1D2	Q6PH85	259 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	USP51	Q70EK9	711 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SPRED1	Q7Z699	444 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	TDRD5	Q8NAT2	981 aa	Known RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	ATL1	Q8WXF7	558 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SLC45A3	Q96JT2	553 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	MCEE	Q96PE7	176 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	UPF3A	Q9H1J1	476 aa	Known RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	TP63	Q9H3D4	680 aa	Predicted RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	RRAGC	Q9HB90	399 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	SAE1	Q9UBE0	346 aa	Predicted RBP	10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	ENPP5	Q9UJA9	477 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	PCDHGA7	Q9Y5G6	932 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	TLL2	Q9Y6L7	1015 aa		10.88	□□□□□ -0.67
CPEB1-215	ENST00000617958	CNTNAP2	Q9UHC6	1331 aa		10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	PSMD11	O00231	422 aa		10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	DYRK3	O43781	588 aa		10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	CALCA	P01258	141 aa		10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	ABCB1	P08183	1280 aa	Predicted RBP	10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	UBL4A	P11441	157 aa		10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	MSX2	P35548	267 aa	Predicted RBP	10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	CAPG	P40121	348 aa		10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	DYNLT1	P63172	113 aa		10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	ATP6AP1	Q15904	470 aa		10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	FAM83A	Q86UY5	434 aa		10.87	□□□□□ -0.67
CPEB1-215	ENST00000617958	ARMC8	Q8IUR7	673 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms