RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 FADS3Q9Y5Q0 445 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ATAD5Q96QE3 1844 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ARFGEF1Q9Y6D6 1849 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 PRSS51A0A1B0GVH4 220 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 KANSL1LA0AUZ9 987 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 NR5A2O00482 541 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 B4GAT1O43505 415 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 FAM189A1O60320 539 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 ENTPD3O75355 529 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 SRP72O76094 671 aaKnown RBP6.77□□□□□ -1.33
LMO3-235ENST00000616247 CXCL8P10145 99 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 ALDH4A1P30038 563 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 LRPAP1P30533 357 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 STX1BP61266 288 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PLIN5Q00G26 463 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PRKCQQ04759 706 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 CDK18Q07002 472 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 STX5Q13190 355 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 DNASE1L3Q13609 305 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 RAB39AQ14964 217 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 METTL21CQ5VZV1 264 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 RSBN1LQ6PCB5 846 aaPredicted RBP6.77□□□□□ -1.33
LMO3-235ENST00000616247 BORAQ6PGQ7 559 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 RNF19BQ6ZMZ0 732 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 HEATR4Q86WZ0 1026 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PYROXD2Q8N2H3 581 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 ACVR1CQ8NER5 493 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 CAPSLQ8WWF8 208 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 HTR3CQ8WXA8 447 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 NTPCRQ9BSD7 190 aaKnown RBP6.77□□□□□ -1.33
LMO3-235ENST00000616247 ADI1Q9BV57 179 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 NOL6Q9H6R4 1146 aaKnown RBP6.77□□□□□ -1.33
LMO3-235ENST00000616247 CHST12Q9NRB3 414 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 RNF146Q9NTX7 359 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 ATAD3AQ9NVI7 634 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 SMOXQ9NWM0 555 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 GPRC5DQ9NZD1 345 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PCDHGC3Q9UN70 934 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 RAP2CQ9Y3L5 183 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 CORINQ9Y5Q5 1042 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 MAST2Q6P0Q8 1798 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 TCRBV5S1A1TA0A578 114 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PTGES3LE9PB15 166 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 H3BMQ9 156 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 AGRPO00253 132 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 ZNF195O14628 629 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 WDR46O15213 610 aaKnown RBP6.77□□□□□ -1.33
LMO3-235ENST00000616247 LYPLA2O95372 231 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 C1QAP02745 245 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 GJB1P08034 283 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 C7P10643 843 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PIM1P11309 404 aaPredicted RBP6.77□□□□□ -1.33
LMO3-235ENST00000616247 ZNF12P17014 697 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PGAM1P18669 254 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PRDX6P30041 224 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 RCVRNP35243 200 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 CAP2P40123 477 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 NKX2-5P52952 324 aaPredicted RBP6.77□□□□□ -1.33
LMO3-235ENST00000616247 IL1RL1Q01638 556 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 ZBTB17Q13105 803 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PRKAA1Q13131 559 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 CAPRIN1Q14444 709 aaKnown RBP6.77□□□□□ -1.33
LMO3-235ENST00000616247 PDK2Q15119 407 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 AMHR2Q16671 573 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 XKR3Q5GH77 459 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 JADE1Q6IE81 842 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 SLC2A7Q6PXP3 512 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 SULF1Q8IWU6 871 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 DHRSXQ8N5I4 330 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 USP33Q8TEY7 942 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 CPB2Q96IY4 423 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 COG8Q96MW5 612 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 BIRC8Q96P09 236 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 EPS8L2Q9H6S3 715 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 FANCEQ9HB96 536 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 POLE4Q9NR33 117 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 HESX1Q9UBX0 185 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PPP1R1BQ9UD71 204 aaPredicted RBP6.77□□□□□ -1.33
LMO3-235ENST00000616247 CROTQ9UKG9 612 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 SNX9Q9Y5X1 595 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 ITGB4P16144 1822 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 PAPPAQ13219 1627 aa6.77□□□□□ -1.33
LMO3-235ENST00000616247 COL14A1Q05707 1796 aaKnown RBP6.76□□□□□ -1.33
LMO3-235ENST00000616247 PRORSD1PA6NEY8 169 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 AP3B1O00203 1094 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 UBDO15205 165 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 ITGBL1O95965 494 aaPredicted RBP6.76□□□□□ -1.33
LMO3-235ENST00000616247 EDN1P05305 212 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 GOT1P17174 413 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 CCND2P30279 289 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 ALDH3B2P48448 385 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 TPTEP56180 551 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 DPYSQ14117 519 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 IMPG1Q17R60 797 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 CERCAMQ5T4B2 595 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 RC3H1Q5TC82 1133 aaKnown RBP6.76□□□□□ -1.33
LMO3-235ENST00000616247 CAMK1DQ8IU85 385 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 BRSK2Q8IWQ3 736 aa6.76□□□□□ -1.33
LMO3-235ENST00000616247 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
LMO3-235ENST00000616247 SHCBP1Q8NEM2 672 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms