RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 THAP12O43422 761 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 SMAD6O43541 496 aaKnown RBP16.28■□□□□ 0.2
DDX39A-216ENST00000591275 CLDN11O75508 207 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 CNTN5O94779 1100 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 ENDOD1O94919 500 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 KCNC4Q03721 635 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 CCDC15Q0P6D6 951 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 PDCLQ13371 301 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 FGL2Q14314 439 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 DRAP1Q14919 205 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-216ENST00000591275 TMEM259Q4ZIN3 620 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 ARSIQ5FYB1 569 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 LINGO4Q6UY18 593 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 ERN2Q76MJ5 926 aaKnown RBP16.28■□□□□ 0.2
DDX39A-216ENST00000591275 EHBP1Q8NDI1 1231 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 TMIEQ8NEW7 156 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 ZNF606Q8WXB4 792 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 IFT43Q96FT9 208 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 MED8Q96G25 268 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 CCDC114Q96M63 670 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 SLC46A1Q96NT5 459 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 GSDMAQ96QA5 445 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 SLC2A13Q96QE2 648 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 GTPBP4Q9BZE4 634 aaKnown RBP16.28■□□□□ 0.2
DDX39A-216ENST00000591275 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-216ENST00000591275 TNKS2Q9H2K2 1166 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 VPS51Q9UID3 782 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 CNTN6Q9UQ52 1028 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 TBC1D30Q9Y2I9 924 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 ENTPD2Q9Y5L3 495 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 AHCTF1Q8WYP5 2266 aa16.28■□□□□ 0.2
DDX39A-216ENST00000591275 K7ENP7 123 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 CASC3O15234 703 aaKnown RBP16.27■□□□□ 0.2
DDX39A-216ENST00000591275 RAD51BO15315 384 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 ARHGAP6O43182 974 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 MED7O43513 233 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 PAGE1O75459 146 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 PAK4O96013 591 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-216ENST00000591275 PRNPP04156 253 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 RHOCP08134 193 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 KRT83P78385 493 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 DEFB133Q30KQ1 61 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 ISM2Q6H9L7 571 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 ZCCHC8Q6NZY4 707 aaKnown RBP16.27■□□□□ 0.2
DDX39A-216ENST00000591275 INO80CQ6PI98 192 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-216ENST00000591275 PRR11Q96HE9 360 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-216ENST00000591275 CEP63Q96MT8 703 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 C2orf49Q9BVC5 232 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-216ENST00000591275 INTS2Q9H0H0 1204 aaKnown RBP16.27■□□□□ 0.2
DDX39A-216ENST00000591275 WDR70Q9NW82 654 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 IL36AQ9UHA7 158 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 KLF15Q9UIH9 416 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 SSUH2Q9Y2M2 353 aa16.27■□□□□ 0.2
DDX39A-216ENST00000591275 UBR5O95071 2799 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-216ENST00000591275 PSMA7O14818 248 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 P4HA2O15460 535 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 AQP9O43315 295 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 LZTS3O60299 673 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-216ENST00000591275 CSF2P04141 144 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 NME1P15531 152 aaKnown RBP16.26■□□□□ 0.19
DDX39A-216ENST00000591275 GNA15P30679 374 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 CDH4P55283 916 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 SKOR1P84550 965 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 ALFQ53S48 1182 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 TPRG1LQ5T0D9 272 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 C22orf39Q6P5X5 142 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 IGF2-ASQ6U949 168 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 KYAT3Q6YP21 454 aaKnown RBP16.26■□□□□ 0.19
DDX39A-216ENST00000591275 CCDC81Q6ZN84 652 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 PRICKLE2Q7Z3G6 844 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 PARGQ86W56 976 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 DCP2Q8IU60 420 aaKnown RBP16.26■□□□□ 0.19
DDX39A-216ENST00000591275 LMX1AQ8TE12 382 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 SMARCE1Q969G3 411 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 CPXM1Q96SM3 734 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 HDAC8Q9BY41 377 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 SLC17A9Q9BYT1 436 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 UBE2TQ9NPD8 197 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-216ENST00000591275 GPR27Q9NS67 375 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 IPO11Q9UI26 975 aaKnown RBP16.26■□□□□ 0.19
DDX39A-216ENST00000591275 SNX10Q9Y5X0 201 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 HS3ST3A1Q9Y663 406 aa16.26■□□□□ 0.19
DDX39A-216ENST00000591275 A0A0D9SEW6 157 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 SPTY2D1-AS1A0A0U1RR47 76 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 H3BM21 787 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 MUSKO15146 869 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 HSF2BPO75031 334 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 LEFTY1O75610 366 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 SMC2O95347 1197 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 WISP1O95388 367 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 CD44P16070 742 aaKnown RBP16.25■□□□□ 0.19
DDX39A-216ENST00000591275 JUNDP17535 347 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 NEK3P51956 506 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 RPS21P63220 83 aaKnown RBP16.25■□□□□ 0.19
DDX39A-216ENST00000591275 PDE1CQ14123 709 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-216ENST00000591275 MEA1Q16626 185 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 ZSCAN23Q3MJ62 389 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 EFHC1Q5JVL4 640 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 PERM1Q5SV97 790 aa16.25■□□□□ 0.19
DDX39A-216ENST00000591275 KLHL10Q6JEL2 608 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms