RNA–Protein interactions for RNA: ENST00000589923.1

GRN-216, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 437 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-216ENST00000589923 CHRNA3P32297 505 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 NFATC3Q12968 1075 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 AUHQ13825 339 aaKnown RBP11.11□□□□□ -0.63
GRN-216ENST00000589923 STILQ15468 1287 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 DEFB133Q30KQ1 61 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 TTC39BQ5VTQ0 682 aaPredicted RBP11.11□□□□□ -0.63
GRN-216ENST00000589923 NEK5Q6P3R8 708 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 KYAT3Q6YP21 454 aaKnown RBP11.11□□□□□ -0.63
GRN-216ENST00000589923 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 PTAR1Q7Z6K3 402 aaPredicted RBP11.11□□□□□ -0.63
GRN-216ENST00000589923 PPM1KQ8N3J5 372 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 KLF6Q99612 283 aaPredicted RBP11.11□□□□□ -0.63
GRN-216ENST00000589923 ABCG4Q9H172 646 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 TCEAL2Q9H3H9 227 aaPredicted RBP11.11□□□□□ -0.63
GRN-216ENST00000589923 POPDC2Q9HBU9 364 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 ACP6Q9NPH0 428 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 ST7Q9NRC1 585 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 VPS28Q9UK41 221 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 CFAP45Q9UL16 551 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 VANGL2Q9ULK5 521 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 CNTN6Q9UQ52 1028 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 TBC1D30Q9Y2I9 924 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 HS3ST4Q9Y661 456 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 LRP4O75096 1905 aa11.11□□□□□ -0.63
GRN-216ENST00000589923 DOCK4Q8N1I0 1966 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 CPED1A4D0V7 1026 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 SART1O43290 800 aaKnown RBP11.1□□□□□ -0.63
GRN-216ENST00000589923 NOBOXO60393 691 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 GCATO75600 419 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 CNTN5O94779 1100 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 MBD3O95983 291 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 ZNF18P17022 549 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 RBMS1P29558 406 aaKnown RBP11.1□□□□□ -0.63
GRN-216ENST00000589923 DUSP3P51452 185 aaPredicted RBP11.1□□□□□ -0.63
GRN-216ENST00000589923 HNRNPKP61978 463 aaKnown RBP eCLIP11.1□□□□□ -0.63
GRN-216ENST00000589923 YWHAZP63104 245 aaKnown RBP11.1□□□□□ -0.63
GRN-216ENST00000589923 EIF2B5Q13144 721 aaKnown RBP11.1□□□□□ -0.63
GRN-216ENST00000589923 PNOCQ13519 176 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 C5orf22Q49AR2 442 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 ALFQ53S48 1182 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 RABGAP1LQ5R372 815 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 LINGO4Q6UY18 593 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 CCDC81Q6ZN84 652 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 RBM44Q6ZP01 1051 aaKnown RBP11.1□□□□□ -0.63
GRN-216ENST00000589923 ERN2Q76MJ5 926 aaKnown RBP11.1□□□□□ -0.63
GRN-216ENST00000589923 B3GNT8Q7Z7M8 397 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 TMEM110Q86TL2 294 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 PARGQ86W56 976 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 SLC35F3Q8IY50 421 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 ZNF683Q8IZ20 524 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 RBFAQ8N0V3 343 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 ATP6V0D2Q8N8Y2 350 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 TMIEQ8NEW7 156 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 GRIN3AQ8TCU5 1115 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 TRIM44Q96DX7 344 aaPredicted RBP11.1□□□□□ -0.63
GRN-216ENST00000589923 RPRD1AQ96P16 312 aaPredicted RBP11.1□□□□□ -0.63
GRN-216ENST00000589923 NT5C1BQ96P26 610 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 SLC2A13Q96QE2 648 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 DUSP23Q9BVJ7 150 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 BOCQ9BWV1 1114 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 HDAC8Q9BY41 377 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 TNKS2Q9H2K2 1166 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 STARD5Q9NSY2 213 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.1□□□□□ -0.63
GRN-216ENST00000589923 IL17BQ9UHF5 180 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 VPS51Q9UID3 782 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 ZDHHC9Q9Y397 364 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 WASF2Q9Y6W5 498 aa11.1□□□□□ -0.63
GRN-216ENST00000589923 SYNJ2BP-COX16A0A087WUM0 186 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 A0A0D9SEW6 157 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 NEMP2A6NFY4 417 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 PMM2O15305 246 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 AQP9O43315 295 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 TNFSF15O95150 251 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 PCDH8O95206 1070 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 GCNT1Q02742 428 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 PDCLQ13371 301 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 TGIF1Q15583 401 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 ZSCAN23Q3MJ62 389 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 COBLL1Q53SF7 1204 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 COLEC12Q5KU26 742 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 C22orf39Q6P5X5 142 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 FOXR1Q6PIV2 292 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 DEFB106AQ8N104 65 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 WDTC1Q8N5D0 677 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 STK32AQ8WU08 396 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 CCDC47Q96A33 483 aaKnown RBP11.09□□□□□ -0.63
GRN-216ENST00000589923 SLC17A9Q9BYT1 436 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 FAM204AQ9H8W3 233 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 METTL14Q9HCE5 456 aaKnown RBP11.09□□□□□ -0.63
GRN-216ENST00000589923 DDIT4Q9NX09 232 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 COX16Q9P0S2 106 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 ARMCX3Q9UH62 379 aaPredicted RBP11.09□□□□□ -0.63
GRN-216ENST00000589923 GGT7Q9UJ14 662 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 RABGEF1Q9UJ41 708 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 ATXN7L1Q9ULK2 861 aaPredicted RBP11.09□□□□□ -0.63
GRN-216ENST00000589923 FADS3Q9Y5Q0 445 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 SNX10Q9Y5X0 201 aa11.09□□□□□ -0.63
GRN-216ENST00000589923 HS3ST3A1Q9Y663 406 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms