RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 WASF2Q9Y6W5 498 aa18.85■□□□□ 0.61
CCDC43-204ENST00000588687 GTPBP10A4D1E9 387 aaKnown RBP18.84■□□□□ 0.61
CCDC43-204ENST00000588687 DRGXA6NNA5 263 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 FFAR2O15552 330 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 OPA1O60313 960 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 DXOO77932 396 aaKnown RBP18.84■□□□□ 0.61
CCDC43-204ENST00000588687 ZIC2O95409 532 aaPredicted RBP18.84■□□□□ 0.61
CCDC43-204ENST00000588687 RHOCP08134 193 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 PNMA6AP0CW24 399 aaPredicted RBP18.84■□□□□ 0.61
CCDC43-204ENST00000588687 PON1P27169 355 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 ACTN2P35609 894 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 USP8P40818 1118 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 C19orf57Q0VDD7 668 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 BRMS1LQ5PSV4 323 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 OR6B2Q6IFH4 312 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 DPY19L2P1Q6NXN4 242 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 LINGO4Q6UY18 593 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 ERN2Q76MJ5 926 aaKnown RBP18.84■□□□□ 0.61
CCDC43-204ENST00000588687 BNIPLQ7Z465 357 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 SETD3Q86TU7 594 aaPredicted RBP18.84■□□□□ 0.61
CCDC43-204ENST00000588687 SLC47A2Q86VL8 602 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 ATP11CQ8NB49 1132 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 VOPP1Q96AW1 172 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 NLGN3Q9NZ94 848 aa18.84■□□□□ 0.61
CCDC43-204ENST00000588687 TEX51A0A1B0GUA7 166 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 ZMPSTE24O75844 475 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 PRNPP04156 253 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 MYF5P13349 255 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 AKT2P31751 481 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 CLCN1P35523 988 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 KRT83P78385 493 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 DAB2P98082 770 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 CCDC173Q0VFZ6 552 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 TRNP1Q6NT89 227 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 DPY19L3Q6ZPD9 716 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 GPR155Q7Z3F1 870 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 ZNF843Q8N446 348 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 FAM181AQ8N9Y4 354 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 GRIN3AQ8TCU5 1115 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 IFT43Q96FT9 208 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 BMFQ96LC9 184 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 APOLD1Q96LR9 279 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 CALN1Q9BXU9 219 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 TNKS2Q9H2K2 1166 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 PLCB1Q9NQ66 1216 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 MPP6Q9NZW5 540 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 BOD1L1Q8NFC6 3051 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 COL6A6A6NMZ7 2263 aa18.83■□□□□ 0.6
CCDC43-204ENST00000588687 BSNQ9UPA5 3926 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 GADD45BO75293 160 aaPredicted RBP18.82■□□□□ 0.6
CCDC43-204ENST00000588687 GP1BAP07359 652 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 CDH5P33151 784 aaPredicted RBP18.82■□□□□ 0.6
CCDC43-204ENST00000588687 EXOC3L4Q17RC7 722 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 KYAT3Q6YP21 454 aaKnown RBP18.82■□□□□ 0.6
CCDC43-204ENST00000588687 GBP6Q6ZN66 633 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 TMC6Q7Z403 805 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 TFAP2DQ7Z6R9 452 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 OR7D4Q8NG98 312 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 CCDC114Q96M63 670 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 TBCBQ99426 244 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 ASCL3Q9NQ33 180 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 RRN3Q9NYV6 651 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 IL36AQ9UHA7 158 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 RWDD2AQ9UIY3 292 aa18.82■□□□□ 0.6
CCDC43-204ENST00000588687 A0A1W2PNU3 283 aaPredicted RBP18.81■□□□□ 0.6
CCDC43-204ENST00000588687 POM121BA6NF01 834 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 A6NNZ2 444 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 K7ESM1 405 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 SCAMP1O15126 338 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 RAD51BO15315 384 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 LEFTY1O75610 366 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 MPOP05164 745 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 PLA2G2AP14555 144 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 SCNN1AP37088 669 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 SULT1E1P49888 294 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 SERPINH1P50454 418 aaKnown RBP18.81■□□□□ 0.6
CCDC43-204ENST00000588687 ARF5P84085 180 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 FZD2Q14332 565 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 ARSIQ5FYB1 569 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 TPRG1LQ5T0D9 272 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 ZDHHC17Q8IUH5 632 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 ZNF548Q8NEK5 533 aaPredicted RBP18.81■□□□□ 0.6
CCDC43-204ENST00000588687 C1orf74Q96LT6 269 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 WDCPQ9H6R7 721 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.81■□□□□ 0.6
CCDC43-204ENST00000588687 FARP1Q9Y4F1 1045 aaPredicted RBP18.81■□□□□ 0.6
CCDC43-204ENST00000588687 FADS3Q9Y5Q0 445 aa18.81■□□□□ 0.6
CCDC43-204ENST00000588687 FOXN3O00409 490 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-204ENST00000588687 SPINT1O43278 529 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 NEBLO76041 1014 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 CD160O95971 181 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 ADRB3P13945 408 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 NME1P15531 152 aaKnown RBP18.8■□□□□ 0.6
CCDC43-204ENST00000588687 ITGB7P26010 798 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 FLT3P36888 993 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 GABRB2P47870 512 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 NEK3P51956 506 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 PCBP4P57723 403 aaKnown RBP18.8■□□□□ 0.6
CCDC43-204ENST00000588687 GABREP78334 506 aa18.8■□□□□ 0.6
CCDC43-204ENST00000588687 PTK2Q05397 1052 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms