RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ATP2A3Q93084 1043 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 PWWP2AQ96N64 755 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 ZNF599Q96NL3 588 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 GBA3Q9H227 469 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 ECT2Q9H8V3 914 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 UBA2Q9UBT2 640 aaPredicted RBP11.52□□□□□ -0.57
VMP1-207ENST00000588131 FAM153AQ9UHL3 310 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 RSPH14Q9UHP6 348 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 VPS51Q9UID3 782 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 TRHDEQ9UKU6 1024 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 ATP8A1Q9Y2Q0 1164 aa11.52□□□□□ -0.57
VMP1-207ENST00000588131 KIAA1549LQ6ZVL6 1849 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 CCDC151A5D8V7 595 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 ANHXE9PGG2 379 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 DYNC1I1O14576 645 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 CHADO15335 359 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 CACNG3O60359 315 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 GDI1P31150 447 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 CTSOP43234 321 aaPredicted RBP11.51□□□□□ -0.57
VMP1-207ENST00000588131 MAGEA6P43360 314 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 MMP13P45452 471 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 SLC6A11P48066 632 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 RENBPP51606 427 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 MAXP61244 160 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 MORF4L2Q15014 288 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 CYTH1Q15438 398 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 MARC1Q5VT66 337 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 ITPRIPL1Q6GPH6 555 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 MTSS1LQ765P7 747 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 KIAA0907Q7Z7F0 614 aaPredicted RBP11.51□□□□□ -0.57
VMP1-207ENST00000588131 PCGF5Q86SE9 256 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.51□□□□□ -0.57
VMP1-207ENST00000588131 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.51□□□□□ -0.57
VMP1-207ENST00000588131 NSMCE1Q8WV22 266 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 HLA-CQ95604 372 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 MLPHQ9BV36 600 aaPredicted RBP11.51□□□□□ -0.57
VMP1-207ENST00000588131 SLC2A11Q9BYW1 496 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 GLOD4Q9HC38 313 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 NT5MQ9NPB1 228 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 GGA2Q9UJY4 613 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 FBXO10Q9UK96 956 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 HPCAL4Q9UM19 191 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 TTLL3Q9Y4R7 772 aa11.51□□□□□ -0.57
VMP1-207ENST00000588131 COL4A2P08572 1712 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 TTC24A2A3L6 582 aaPredicted RBP11.5□□□□□ -0.57
VMP1-207ENST00000588131 GOLGA8MH3BSY2 632 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 ARNTLO00327 626 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 GJB3O75712 270 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 NEBLO76041 1014 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 MT-CO1P00395 513 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 CISD3P0C7P0 127 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 PABPC1P11940 636 aaKnown RBP11.5□□□□□ -0.57
VMP1-207ENST00000588131 TPSB2P20231 275 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 FDFT1P37268 417 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 RGRP47804 291 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 CAV1Q03135 178 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 NIPAL4Q0D2K0 466 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 SLC12A1Q13621 1099 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 RUNX3Q13761 415 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 ZNF235Q14590 738 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 TPSAB1Q15661 275 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 GEN1Q17RS7 908 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 TMEM215Q68D42 235 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 NAIF1Q69YI7 327 aaPredicted RBP11.5□□□□□ -0.57
VMP1-207ENST00000588131 ADIPOR2Q86V24 386 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 HOOK3Q86VS8 718 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 ETFBKMTQ8IXQ9 262 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 CPA6Q8N4T0 437 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 PDCD7Q8N8D1 485 aaKnown RBP11.5□□□□□ -0.57
VMP1-207ENST00000588131 TSEN2Q8NCE0 465 aaKnown RBP11.5□□□□□ -0.57
VMP1-207ENST00000588131 SPATA22Q8NHS9 363 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 EXOC4Q96A65 974 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 CHFRQ96EP1 664 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 OXNAD1Q96HP4 312 aaPredicted RBP11.5□□□□□ -0.57
VMP1-207ENST00000588131 GDAP1L1Q96MZ0 367 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 XPO6Q96QU8 1125 aaKnown RBP11.5□□□□□ -0.57
VMP1-207ENST00000588131 FCRL5Q96RD9 977 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 FMO2Q99518 471 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 C2orf49Q9BVC5 232 aaPredicted RBP11.5□□□□□ -0.57
VMP1-207ENST00000588131 TRMT61BQ9BVS5 477 aaKnown RBP11.5□□□□□ -0.57
VMP1-207ENST00000588131 FAM129AQ9BZQ8 928 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 DNAJC17Q9NVM6 304 aaKnown RBP11.5□□□□□ -0.57
VMP1-207ENST00000588131 GTSE1Q9NYZ3 720 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 UBP1Q9NZI7 540 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 SHOC2Q9UQ13 582 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 SZT2Q5T011 3432 aa11.5□□□□□ -0.57
VMP1-207ENST00000588131 MIA3Q5JRA6 1907 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 E7EVH7 732 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 K7ERQ8 282 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 NDC80O14777 642 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 TULP3O75386 442 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 ERLIN1O75477 346 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 TMCC1O94876 653 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 MT-CYBP00156 380 aaPredicted RBP11.49□□□□□ -0.57
VMP1-207ENST00000588131 APRTP07741 180 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 MMP2P08253 660 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 OPRD1P41143 372 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 GRIA1P42261 906 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 DGKGP49619 791 aa11.49□□□□□ -0.57
VMP1-207ENST00000588131 STK19P49842 368 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms