RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SPTY2D1-AS1A0A0U1RR47 76 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 A6NNZ2 444 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 E5RJQ4 531 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 TERTO14746 1132 aaKnown RBP10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 AQP9O43315 295 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 CNTN5O94779 1100 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 ENDOD1O94919 500 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 NME1P15531 152 aaKnown RBP10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 JUNDP17535 347 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 RRM1P23921 792 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 PRCPP42785 496 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 OXCT1P55809 520 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 CCDC15Q0P6D6 951 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 C1orf61Q13536 156 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 PDE1CQ14123 709 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 STILQ15468 1287 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 TMEM259Q4ZIN3 620 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 RABGAP1LQ5R372 815 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 LINGO4Q6UY18 593 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 USP53Q70EK8 1073 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 CLEC14AQ86T13 490 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 DCP2Q8IU60 420 aaKnown RBP10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 DEFB106AQ8N104 65 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 RNF34Q969K3 372 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 GRAMD1AQ96CP6 724 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 NT5C1BQ96P26 610 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 PSMB7Q99436 277 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 IL12RB2Q99665 862 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 ARHGAP9Q9BRR9 750 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 SLC4A5Q9BY07 1137 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 MUC3BQ9H195 1237 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 TNKS2Q9H2K2 1166 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 TCEAL2Q9H3H9 227 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 DYRK4Q9NR20 520 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 GPR27Q9NS67 375 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 FARP1Q9Y4F1 1045 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 HS3ST4Q9Y661 456 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 CSNK1G3Q9Y6M4 447 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 RELNP78509 3460 aa10.35□□□□□ -0.75
NPLOC4-220ENST00000576940 TRIM49BA6NDI0 452 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 SART1O43290 800 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 SUV39H1O43463 412 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 NOBOXO60393 691 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 GCATO75600 419 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 GJB6O95452 261 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 SLC5A2P31639 672 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 CCR1P32246 355 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 ACADSBP45954 432 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 FMO5P49326 533 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 PDX1P52945 283 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 ADKP55263 362 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 FKBP3Q00688 224 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 C1QBPQ07021 282 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 EIF2B5Q13144 721 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 NR0B2Q15466 257 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 TTC39BQ5VTQ0 682 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 TMEM110Q86TL2 294 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 PARGQ86W56 976 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 ARHGEF19Q8IW93 802 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 RBFAQ8N0V3 343 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 TPCN2Q8NHX9 752 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 LMO3Q8TAP4 145 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 FAM174AQ8TBP5 190 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 GRIN3AQ8TCU5 1115 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 FEM1CQ96JP0 617 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 PPP1R13BQ96KQ4 1090 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 MED15Q96RN5 788 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 CCDC3Q9BQI4 270 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 HDAC8Q9BY41 377 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 SIK2Q9H0K1 926 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 THAP9Q9H5L6 903 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 SYNDIG1Q9H7V2 258 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 FAM204AQ9H8W3 233 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 ACP6Q9NPH0 428 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 STARD5Q9NSY2 213 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 DDIT4Q9NX09 232 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 ARMCX3Q9UH62 379 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 IL36AQ9UHA7 158 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 PNMA8BQ9ULN7 279 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 HS3ST2Q9Y278 367 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 TBC1D30Q9Y2I9 924 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 SNX10Q9Y5X0 201 aa10.34□□□□□ -0.75
NPLOC4-220ENST00000576940 PTPN13Q12923 2485 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 CCDC187A0A096LP49 1063 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 A0A0D9SEW6 157 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 FAM237AA0A1B0GTK4 181 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 H3BM21 787 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 AGRPO00253 132 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 TPP1O14773 563 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 SLC16A3O15427 465 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 CLDN11O75508 207 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 ZNF821O75541 412 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 LEFTY1O75610 366 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 TCEA3O75764 348 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 GRAP2O75791 330 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 ZNF202O95125 648 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 PRNPP04156 253 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 ITGA2BP08514 1039 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 FAM87AP0C7U9 286 aa10.33□□□□□ -0.76
NPLOC4-220ENST00000576940 HGFP14210 728 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms