RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 MYOCQ99972 504 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 HDAC8Q9BY41 377 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 PPARGC1AQ9UBK2 798 aaKnown RBP15.26■□□□□ 0.03
LRRC28-213ENST00000559399 FAM208BQ5VWN6 2430 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 SDC3O75056 442 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 LEFTY1O75610 366 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 ZMPSTE24O75844 475 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 ENDOD1O94919 500 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 CYP1A1P04798 512 aaPredicted RBP15.25■□□□□ 0.03
LRRC28-213ENST00000559399 THEGLP0DJG4 465 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 SDC4P31431 198 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 AKT2P31751 481 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 ARF5P84085 180 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 GNA12Q03113 381 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 SLC20A2Q08357 652 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 ILKQ13418 452 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 ARL13BQ3SXY8 428 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 FKBP15Q5T1M5 1219 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 CDKAL1Q5VV42 579 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 TRIM72Q6ZMU5 477 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 DRC7Q8IY82 874 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 PCDH20Q8N6Y1 951 aaKnown RBP15.25■□□□□ 0.03
LRRC28-213ENST00000559399 NXPE2Q96DL1 559 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 VPS16Q9H269 839 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 FAM207AQ9NSI2 230 aaPredicted RBP15.25■□□□□ 0.03
LRRC28-213ENST00000559399 WASF2Q9Y6W5 498 aa15.25■□□□□ 0.03
LRRC28-213ENST00000559399 RNF103O00237 685 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 ZNF821O75541 412 aaPredicted RBP15.24■□□□□ 0.03
LRRC28-213ENST00000559399 PCDH8O95206 1070 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 JUPP14923 745 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 CKMT2P17540 419 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 HNRNPA2B1P22626 353 aaKnown RBP15.24■□□□□ 0.03
LRRC28-213ENST00000559399 SOX5P35711 763 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 ETFBP38117 255 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 KLK7P49862 253 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 DNA2P51530 1060 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 NEK3P51956 506 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 POLR2FP61218 127 aaKnown RBP15.24■□□□□ 0.03
LRRC28-213ENST00000559399 KRT31Q15323 416 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 CDO1Q16878 200 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 COL28A1Q2UY09 1125 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 HES3Q5TGS1 186 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 KLK6Q92876 244 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 C11orf70Q9BRQ4 267 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 FZD3Q9NPG1 666 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 SCUBE2Q9NQ36 999 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 KLHL11Q9NVR0 708 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 DAAM1Q9Y4D1 1078 aa15.24■□□□□ 0.03
LRRC28-213ENST00000559399 CXorf51AA0A1B0GTR3 108 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 HOXB3P14651 431 aaPredicted RBP15.23■□□□□ 0.03
LRRC28-213ENST00000559399 ITGB7P26010 798 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 ADRA1BP35368 520 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 MAPKAPK2P49137 400 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 CCNHP51946 323 aaPredicted RBP15.23■□□□□ 0.03
LRRC28-213ENST00000559399 CLDN6P56747 220 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 JAM2P57087 298 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 FMO1Q01740 532 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 NRG1Q02297 640 aaPredicted RBP15.23■□□□□ 0.03
LRRC28-213ENST00000559399 C15orf59Q2T9L4 293 aaPredicted RBP15.23■□□□□ 0.03
LRRC28-213ENST00000559399 PROX2Q3B8N5 592 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 CCDC14Q49A88 953 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 TMEM259Q4ZIN3 620 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 CARD16Q5EG05 197 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 MANEALQ5VSG8 457 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 SEL1L3Q68CR1 1132 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 RWDD4Q6NW29 188 aaKnown RBP15.23■□□□□ 0.03
LRRC28-213ENST00000559399 GCNT7Q6ZNI0 430 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 STRADAQ7RTN6 431 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 PHLDB2Q86SQ0 1253 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 PDZD3Q86UT5 571 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 SLC30A5Q8TAD4 765 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 RXFP2Q8WXD0 754 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 HEPHQ9BQS7 1158 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 CALN1Q9BXU9 219 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 RETREG1Q9H6L5 497 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 NLRC4Q9NPP4 1024 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 OR12D3Q9UGF7 316 aa15.23■□□□□ 0.03
LRRC28-213ENST00000559399 ZFR2Q9UPR6 939 aaKnown RBP15.23■□□□□ 0.03
LRRC28-213ENST00000559399 FCF1Q9Y324 198 aaKnown RBP15.23■□□□□ 0.03
LRRC28-213ENST00000559399 C2CD4BA6NLJ0 364 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 A6NNZ2 444 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 EPHB6O15197 1021 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 SIGLEC6O43699 453 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 ADRB3P13945 408 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 RHOQP17081 205 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 CHRNB2P17787 502 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 ACP1P24666 158 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 ACVRL1P37023 503 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 STAT1P42224 750 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 PTPN9P43378 593 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 NSFP46459 744 aaKnown RBP15.22■□□□□ 0.03
LRRC28-213ENST00000559399 GEMIN4P57678 1058 aaKnown RBP15.22■□□□□ 0.03
LRRC28-213ENST00000559399 CLDN2P57739 230 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 RPS21P63220 83 aaKnown RBP15.22■□□□□ 0.03
LRRC28-213ENST00000559399 TARDBPQ13148 414 aaKnown RBP eCLIP15.22■□□□□ 0.03
LRRC28-213ENST00000559399 ZNF211Q13398 564 aaPredicted RBP15.22■□□□□ 0.03
LRRC28-213ENST00000559399 RAB6CQ53S08 254 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 HS1BP3Q53T59 392 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 KIAA1161Q6NSJ0 714 aa15.22■□□□□ 0.03
LRRC28-213ENST00000559399 FBXL19Q6PCT2 694 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms