RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 SP5Q6BEB4 398 aaPredicted RBP9.66□□□□□ -0.86
NEDD1-211ENST00000557454 NEK5Q6P3R8 708 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 SYCP3Q8IZU3 236 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 CARNMT1Q8N4J0 409 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 ZNF557Q8N988 423 aaPredicted RBP9.66□□□□□ -0.86
NEDD1-211ENST00000557454 ZNF454Q8N9F8 522 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 RCBTB1Q8NDN9 531 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 FRS2Q8WU20 508 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 MYEOVQ96EZ4 313 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 PRICKLE1Q96MT3 831 aaPredicted RBP9.66□□□□□ -0.86
NEDD1-211ENST00000557454 TAAR9Q96RI9 348 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 HAPLN3Q96S86 360 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 TM6SF1Q9BZW5 370 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 INTS2Q9H0H0 1204 aaKnown RBP9.66□□□□□ -0.86
NEDD1-211ENST00000557454 MRPL44Q9H9J2 332 aaKnown RBP9.66□□□□□ -0.86
NEDD1-211ENST00000557454 CYP4F12Q9HCS2 524 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 RRN3Q9NYV6 651 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 AKAP7Q9P0M2 348 aaPredicted RBP9.66□□□□□ -0.86
NEDD1-211ENST00000557454 LUZP4Q9P127 313 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 TLK1Q9UKI8 766 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 PCDHGA3Q9Y5H0 932 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 HS3ST3A1Q9Y663 406 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 USP3Q9Y6I4 520 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 CROCCQ5TZA2 2017 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 UNC13CQ8NB66 2214 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 DCHS2Q6V1P9 2916 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 ZNF469Q96JG9 3925 aaPredicted RBP9.65□□□□□ -0.86
NEDD1-211ENST00000557454 ZNF233A6NK53 670 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 MSI1O43347 362 aaKnown RBP9.65□□□□□ -0.86
NEDD1-211ENST00000557454 RFPL1O75677 317 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 PCDH8O95206 1070 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 GCNT3O95395 438 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 LATS1O95835 1130 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 FGF3P11487 239 aaPredicted RBP9.65□□□□□ -0.86
NEDD1-211ENST00000557454 TNNI1P19237 187 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 TCN2P20062 427 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 CASP5P51878 434 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 NDST1P52848 882 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 YWHAGP61981 247 aaKnown RBP eCLIP9.65□□□□□ -0.86
NEDD1-211ENST00000557454 RPS24P62847 133 aaKnown RBP9.65□□□□□ -0.86
NEDD1-211ENST00000557454 NR6A1Q15406 480 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 MAP9Q49MG5 647 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 FAM133BQ5BKY9 247 aaKnown RBP9.65□□□□□ -0.86
NEDD1-211ENST00000557454 CEP135Q66GS9 1140 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 GDF7Q7Z4P5 450 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 SPRED1Q7Z699 444 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 SKAP1Q86WV1 359 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 APCDD1Q8J025 514 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 HJURPQ8NCD3 748 aaPredicted RBP9.65□□□□□ -0.86
NEDD1-211ENST00000557454 ART4Q93070 314 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 SRRTQ9BXP5 876 aaKnown RBP9.65□□□□□ -0.86
NEDD1-211ENST00000557454 RUBCNLQ9H714 662 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 SFMBT1Q9UHJ3 866 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 DOLKQ9UPQ8 538 aa9.65□□□□□ -0.86
NEDD1-211ENST00000557454 HBS1LQ9Y450 684 aaKnown RBP9.65□□□□□ -0.86
NEDD1-211ENST00000557454 MRPS18BQ9Y676 258 aaKnown RBP9.65□□□□□ -0.86
NEDD1-211ENST00000557454 NBEAL1Q6ZS30 2694 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 MOCS3O95396 460 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 MC1RQ01726 317 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 ZNF699Q32M78 642 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 ZRANB3Q5FWF4 1079 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 CRYBG2Q8N1P7 616 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 ARHGAP18Q8N392 663 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 RAD54LQ92698 747 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 SYAP1Q96A49 352 aaPredicted RBP9.64□□□□□ -0.87
NEDD1-211ENST00000557454 TBATAQ96M53 351 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 EFHD1Q9BUP0 239 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 FGFBP2Q9BYJ0 223 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 SLC13A1Q9BZW2 595 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 RDH14Q9HBH5 336 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 GPR34Q9UPC5 381 aa9.64□□□□□ -0.87
NEDD1-211ENST00000557454 OAS3Q9Y6K5 1087 aaKnown RBP9.64□□□□□ -0.87
NEDD1-211ENST00000557454 DIDO1Q9BTC0 2240 aaKnown RBP9.64□□□□□ -0.87
NEDD1-211ENST00000557454 HEATR9A2RTY3 570 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 BHMG1C9JSJ3 638 aaPredicted RBP9.63□□□□□ -0.87
NEDD1-211ENST00000557454 PRSS44E7EML9 344 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 BNIP3LO60238 219 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 DNAJB5O75953 348 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 NADKO95544 446 aaPredicted RBP9.63□□□□□ -0.87
NEDD1-211ENST00000557454 PAK4O96013 591 aaPredicted RBP9.63□□□□□ -0.87
NEDD1-211ENST00000557454 CTSLP07711 333 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 DRD2P14416 443 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 ZNF18P17022 549 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 ATICP31939 592 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 NNMTP40261 264 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 ZNF667Q5HYK9 610 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 FAXCQ5TGI0 409 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 NADSYN1Q6IA69 706 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 Q6ZVU0 165 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 NLGN4XQ8N0W4 816 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 NLGN4YQ8NFZ3 816 aaPredicted RBP9.63□□□□□ -0.87
NEDD1-211ENST00000557454 OR6C4Q8NGE1 309 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 NDRG1Q92597 394 aaKnown RBP9.63□□□□□ -0.87
NEDD1-211ENST00000557454 CCDC127Q96BQ5 260 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 C8orf76Q96K31 380 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 TWNKQ96RR1 684 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 DDA1Q9BW61 102 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 SLC17A9Q9BYT1 436 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 APPL1Q9UKG1 709 aa9.63□□□□□ -0.87
NEDD1-211ENST00000557454 PILRAQ9UKJ1 303 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms