RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PCDH8O95206 1070 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 THEGLP0DJG4 465 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 HOXB3P14651 431 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-213ENST00000557262 CKMT2P17540 419 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 GLDCP23378 1020 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 HNF1BP35680 557 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 ILKQ13418 452 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 ZNF284Q2VY69 593 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 C22orf39Q6P5X5 142 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 DPY19L3Q6ZPD9 716 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 TMEM145Q8NBT3 493 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 ENOX1Q8TC92 643 aaKnown RBP16.23■□□□□ 0.19
TUBB3-213ENST00000557262 HNRNPLLQ8WVV9 542 aaKnown RBP16.23■□□□□ 0.19
TUBB3-213ENST00000557262 KLK6Q92876 244 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 PPP1R16AQ96I34 528 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 CEP44Q9C0F1 390 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 VPS16Q9H269 839 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 TNKS2Q9H2K2 1166 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 ATP13A1Q9HD20 1204 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 TAB2Q9NYJ8 693 aa16.23■□□□□ 0.19
TUBB3-213ENST00000557262 KNTC1P50748 2209 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 ADAMTS20P59510 1910 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 RNF103O00237 685 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 LEFTY1O75610 366 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 GFPT2O94808 682 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 CYP1A1P04798 512 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-213ENST00000557262 PRLRP16471 622 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 AKT2P31751 481 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 ADRA1BP35368 520 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 SERPINH1P50454 418 aaKnown RBP16.22■□□□□ 0.19
TUBB3-213ENST00000557262 DNA2P51530 1060 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 ATP11AP98196 1134 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 CDR2Q01850 454 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 GNA12Q03113 381 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 COL28A1Q2UY09 1125 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 ARL13BQ3SXY8 428 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 CARD16Q5EG05 197 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 PCDH20Q8N6Y1 951 aaKnown RBP16.22■□□□□ 0.19
TUBB3-213ENST00000557262 EMC1Q8N766 993 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 GRIN3AQ8TCU5 1115 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 SLC20A1Q8WUM9 679 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 HEPHQ9BQS7 1158 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 GANQ9H2C0 597 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 RETREG1Q9H6L5 497 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 SCUBE2Q9NQ36 999 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 METTL5Q9NRN9 209 aaKnown RBP16.22■□□□□ 0.19
TUBB3-213ENST00000557262 KLHL11Q9NVR0 708 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 OR12D3Q9UGF7 316 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 NOCTQ9UK39 431 aaKnown RBP16.22■□□□□ 0.19
TUBB3-213ENST00000557262 WASF2Q9Y6W5 498 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 DOCK9Q9BZ29 2069 aa16.22■□□□□ 0.19
TUBB3-213ENST00000557262 CXorf51AA0A1B0GTR3 108 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 SDC3O75056 442 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 TPM2P07951 284 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 CHRNB2P17787 502 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 HNRNPA2B1P22626 353 aaKnown RBP16.21■□□□□ 0.19
TUBB3-213ENST00000557262 MMP8P22894 467 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 SOX5P35711 763 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 POLR2FP61218 127 aaKnown RBP16.21■□□□□ 0.19
TUBB3-213ENST00000557262 NRG1Q02297 640 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-213ENST00000557262 TARDBPQ13148 414 aaKnown RBP eCLIP16.21■□□□□ 0.19
TUBB3-213ENST00000557262 CCDC14Q49A88 953 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 FBXL19Q6PCT2 694 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 DRC7Q8IY82 874 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 SLC25A45Q8N413 288 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 FAM174AQ8TBP5 190 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 RXFP2Q8WXD0 754 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 FEM1CQ96JP0 617 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 MYOCQ99972 504 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 OSBPL2Q9H1P3 480 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 ZFR2Q9UPR6 939 aaKnown RBP16.21■□□□□ 0.19
TUBB3-213ENST00000557262 HS3ST3A1Q9Y663 406 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 ITPR1Q14643 2758 aa16.21■□□□□ 0.19
TUBB3-213ENST00000557262 ATRXP46100 2492 aa16.21■□□□□ 0.18
TUBB3-213ENST00000557262 URB1O60287 2271 aaKnown RBP16.2■□□□□ 0.18
TUBB3-213ENST00000557262 TRIM38O00635 465 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 ACP1P24666 158 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 SDC4P31431 198 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 L1CAMP32004 1257 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 ETFBP38117 255 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 NEK3P51956 506 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 CLDN6P56747 220 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 ARF5P84085 180 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 FMO1Q01740 532 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 ZNF211Q13398 564 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-213ENST00000557262 KRT31Q15323 416 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 CDO1Q16878 200 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 C15orf59Q2T9L4 293 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-213ENST00000557262 PROX2Q3B8N5 592 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 RAB6CQ53S08 254 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 FKBP15Q5T1M5 1219 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 HES3Q5TGS1 186 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 PHLDB2Q86SQ0 1253 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 PDZD3Q86UT5 571 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 PLPP6Q8IY26 295 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 CACTIN-AS1Q8N1I8 211 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 OR13H1Q8NG92 308 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 SLC30A5Q8TAD4 765 aa16.2■□□□□ 0.18
TUBB3-213ENST00000557262 ISG20Q96AZ6 181 aaKnown RBP16.2■□□□□ 0.18
TUBB3-213ENST00000557262 SLC17A9Q9BYT1 436 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms