RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 IFNA14P01570 189 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 BMP1P13497 986 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 MMP8P22894 467 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 HSPA1LP34931 641 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 HNF1BP35680 557 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 NPY2RP49146 381 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 ACOT2P49753 483 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 TOP3AQ13472 1001 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-226ENST00000556825 HIST2H2ACQ16777 129 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-226ENST00000556825 ZNF181Q2M3W8 571 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 TYSND1Q2T9J0 566 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 IFIT1BQ5T764 474 aaKnown RBP14.01□□□□□ -0.17
SHMT2-226ENST00000556825 ARSKQ6UWY0 536 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 ABRAXAS1Q6UWZ7 409 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 SLC9A9Q8IVB4 645 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 TDRD5Q8NAT2 981 aaKnown RBP14.01□□□□□ -0.17
SHMT2-226ENST00000556825 PMM1Q92871 262 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 ATP6V1E2Q96A05 226 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 CIDECQ96AQ7 238 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-226ENST00000556825 RNF170Q96K19 258 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 GHITMQ9H3K2 345 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 CD93Q9NPY3 652 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 PLLPQ9Y342 182 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 CCDC195A0A1B0GUA6 201 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 M0R2N6 131 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 TOR1BO14657 336 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 TSPAN4O14817 238 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 TRIM16O95361 564 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 VNN1O95497 513 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 YES1P07947 543 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 XRCC5P13010 732 aaKnown RBP14□□□□□ -0.17
SHMT2-226ENST00000556825 FGFR3P22607 806 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 POLR2IP36954 125 aaKnown RBP14□□□□□ -0.17
SHMT2-226ENST00000556825 EIF2DP41214 584 aaKnown RBP14□□□□□ -0.17
SHMT2-226ENST00000556825 MRPL28Q13084 256 aaKnown RBP14□□□□□ -0.17
SHMT2-226ENST00000556825 LAMC2Q13753 1193 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 CEACAM7Q14002 265 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 DRAP1Q14919 205 aaPredicted RBP14□□□□□ -0.17
SHMT2-226ENST00000556825 MORF4L2Q15014 288 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 TBRG1Q3YBR2 411 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 MTX3Q5HYI7 312 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 PM20D1Q6GTS8 502 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 RINT1Q6NUQ1 792 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 ZNF773Q6PK81 442 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 CRTC3Q6UUV7 619 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 BBS12Q6ZW61 710 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 HORMAD1Q86X24 394 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 CCDC185Q8N715 623 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 PACRGLQ8N7B6 248 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 UBR7Q8N806 425 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 RHOXF1Q8NHV9 184 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 PIWIL2Q8TC59 973 aaKnown RBP14□□□□□ -0.17
SHMT2-226ENST00000556825 RAD54LQ92698 747 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 ST6GAL2Q96JF0 529 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 ZNF578Q96N58 590 aaPredicted RBP14□□□□□ -0.17
SHMT2-226ENST00000556825 PNMA5Q96PV4 448 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 UHRF1Q96T88 793 aaPredicted RBP14□□□□□ -0.17
SHMT2-226ENST00000556825 FAM96AQ9H5X1 160 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 FBXO28Q9NVF7 368 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 GLTPQ9NZD2 209 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 COQ3Q9NZJ6 369 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 FAM8A1Q9UBU6 413 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 CACNG2Q9Y698 323 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 KCPQ6ZWJ8 1503 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 ITGB4P16144 1822 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 F8W810 466 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 ABCB7O75027 752 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 GOT2P00505 430 aaKnown RBP14□□□□□ -0.17
SHMT2-226ENST00000556825 MSX2P35548 267 aaPredicted RBP14□□□□□ -0.17
SHMT2-226ENST00000556825 TECP42680 631 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 HTR3AP46098 478 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 SLC36A3Q495N2 470 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 ARHGEF16Q5VV41 709 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 PLEKHM3Q6ZWE6 761 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 PM20D2Q8IYS1 436 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 ANKFN1Q8N957 763 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 KYQ8NBH2 561 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 PIK3C3Q8NEB9 887 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 PSMA8Q8TAA3 256 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 LPGAT1Q92604 370 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 FKBP10Q96AY3 582 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 AGPAT1Q99943 283 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 HERPUD2Q9BSE4 406 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 ADI1Q9BV57 179 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 KIFC1Q9BW19 673 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 MCCC2Q9HCC0 563 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 SLC35C2Q9NQQ7 365 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 ABCB10Q9NRK6 738 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 SLCO3A1Q9UIG8 710 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 MAN2B2Q9Y2E5 1009 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 SNX8Q9Y5X2 465 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 TOGARAM1Q9Y4F4 1720 aa14□□□□□ -0.17
SHMT2-226ENST00000556825 PSKH1P11801 424 aa13.99□□□□□ -0.17
SHMT2-226ENST00000556825 HOXB3P14651 431 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-226ENST00000556825 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-226ENST00000556825 CBLP22681 906 aa13.99□□□□□ -0.17
SHMT2-226ENST00000556825 EEF1B2P24534 225 aaKnown RBP13.99□□□□□ -0.17
SHMT2-226ENST00000556825 SSTR1P30872 391 aa13.99□□□□□ -0.17
SHMT2-226ENST00000556825 IDH3AP50213 366 aa13.99□□□□□ -0.17
SHMT2-226ENST00000556825 SLC12A2P55011 1212 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms