RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 MT-CO1P00395 513 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 HLA-DQB2P05538 268 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 ATP5BP06576 529 aaKnown RBP9.94□□□□□ -0.82
CHD8-204ENST00000553622 RPL22P35268 128 aaKnown RBP9.94□□□□□ -0.82
CHD8-204ENST00000553622 NNMTP40261 264 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 GALK1P51570 392 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 PLK1P53350 603 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 SEC13P55735 322 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 MAXP61244 160 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 RHOAP61586 193 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 IFI35P80217 286 aaPredicted RBP9.94□□□□□ -0.82
CHD8-204ENST00000553622 BASP1P80723 227 aaKnown RBP9.94□□□□□ -0.82
CHD8-204ENST00000553622 MESP2Q0VG99 397 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 WASHC5Q12768 1159 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 PON2Q15165 354 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 ERCC6LQ2NKX8 1250 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 P3H1Q32P28 736 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 FNDC3BQ53EP0 1204 aaKnown RBP9.94□□□□□ -0.82
CHD8-204ENST00000553622 GLE1Q53GS7 698 aaKnown RBP9.94□□□□□ -0.82
CHD8-204ENST00000553622 TEX44Q53QW1 395 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 SYCP2LQ5T4T6 812 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 TMEM215Q68D42 235 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 ITPRIPL1Q6GPH6 555 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 TPRG1Q6ZUI0 275 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 ADIPOR2Q86V24 386 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 SFTPA1Q8IWL2 248 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.94□□□□□ -0.82
CHD8-204ENST00000553622 TERB1Q8NA31 727 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 CCHCR1Q8TD31 782 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 UCMAQ8WVF2 138 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 SLCO2A1Q92959 643 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 EXOC4Q96A65 974 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 ACDQ96AP0 544 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 LRRC45Q96CN5 670 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 EXOC2Q96KP1 924 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 ZNF599Q96NL3 588 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 VAT1Q99536 393 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 EPC1Q9H2F5 836 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 C8orf33Q9H7E9 229 aaPredicted RBP9.94□□□□□ -0.82
CHD8-204ENST00000553622 RAB6BQ9NRW1 208 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 PAK5Q9P286 719 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 SEPT3Q9UH03 358 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 FBXO10Q9UK96 956 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 FBXL21Q9UKT6 434 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 TRHDEQ9UKU6 1024 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 CA14Q9ULX7 337 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 ERVW-1Q9UQF0 538 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 SLC27A6Q9Y2P4 619 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 SNX24Q9Y343 169 aa9.94□□□□□ -0.82
CHD8-204ENST00000553622 ESYT3A0FGR9 886 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 TTC24A2A3L6 582 aaPredicted RBP9.93□□□□□ -0.82
CHD8-204ENST00000553622 PRRT4C9JH25 899 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 SMAD6O43541 496 aaKnown RBP9.93□□□□□ -0.82
CHD8-204ENST00000553622 GCATO75600 419 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 PEX11BO96011 259 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 ASLP04424 464 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 NFKB1P19838 968 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 PSMB4P28070 264 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 EIF2DP41214 584 aaKnown RBP9.93□□□□□ -0.82
CHD8-204ENST00000553622 GRIA2P42262 883 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 SERPINH1P50454 418 aaKnown RBP9.93□□□□□ -0.82
CHD8-204ENST00000553622 ST8SIA6P61647 398 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 TUBB4BP68371 445 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 DSC2Q02487 901 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 HNRNPDQ14103 355 aaKnown RBP9.93□□□□□ -0.82
CHD8-204ENST00000553622 PRPSAP1Q14558 356 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 RFTN1Q14699 578 aaPredicted RBP9.93□□□□□ -0.82
CHD8-204ENST00000553622 CYTH1Q15438 398 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 ATXN7L2Q5T6C5 722 aaPredicted RBP9.93□□□□□ -0.82
CHD8-204ENST00000553622 IER5LQ5T953 404 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 IZUMO3Q5VZ72 239 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 TXNDC11Q6PKC3 985 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 RALGPS2Q86X27 583 aaPredicted RBP9.93□□□□□ -0.82
CHD8-204ENST00000553622 PAF1Q8N7H5 531 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 ATXN2LQ8WWM7 1075 aaKnown RBP9.93□□□□□ -0.82
CHD8-204ENST00000553622 IFT81Q8WYA0 676 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 MAML1Q92585 1016 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 RTP4Q96DX8 246 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 ERLEC1Q96DZ1 483 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 ASB2Q96Q27 587 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 IL12RB2Q99665 862 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 ERP44Q9BS26 406 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 TM6SF2Q9BZW4 377 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 GBA3Q9H227 469 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 TNKS2Q9H2K2 1166 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 GLOD4Q9HC38 313 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 EPB41L5Q9HCM4 733 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 ZDHHC4Q9NPG8 344 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 SCUBE2Q9NQ36 999 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 ELOVL2Q9NXB9 296 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 UBP1Q9NZI7 540 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 DUSP12Q9UNI6 340 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 PLA2G4CQ9UP65 541 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 SLC8A2Q9UPR5 921 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 SORCS3Q9UPU3 1222 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 CKAP5Q14008 2032 aa9.93□□□□□ -0.82
CHD8-204ENST00000553622 TIMM44O43615 452 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 PMPCBO75439 489 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 METTL18O95568 372 aa9.92□□□□□ -0.82
CHD8-204ENST00000553622 IGSF6O95976 241 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms