RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 C1orf162Q8NEQ5 155 aaPredicted RBP5.78□□□□□ -1.48
PFDN5-209ENST00000550069 SPATA20Q8TB22 786 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 BICD1Q96G01 975 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 CEP295NLQ96MC4 621 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 AGAP3Q96P47 875 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 TCHPQ9BT92 498 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 ZNF747Q9BV97 191 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 ACE2Q9BYF1 805 aaPredicted RBP5.78□□□□□ -1.48
PFDN5-209ENST00000550069 LDAHQ9H6V9 325 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 CWH43Q9H720 699 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 MINDY3Q9H8M7 445 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 EXOC1Q9NV70 894 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 TBC1D13Q9NVG8 400 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 CEP72Q9P209 647 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 FNIP2Q9P278 1114 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 TRPS1Q9UHF7 1281 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 TUBD1Q9UJT1 453 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 UBQLN1Q9UMX0 589 aaKnown RBP5.78□□□□□ -1.48
PFDN5-209ENST00000550069 TRAF3IP3Q9Y228 551 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 MYRFQ9Y2G1 1151 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 GPR45Q9Y5Y3 372 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 NCOR1O75376 2440 aa5.78□□□□□ -1.48
PFDN5-209ENST00000550069 SF3B1O75533 1304 aaKnown RBP eCLIP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 PLXNA4Q9HCM2 1894 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 TTC26A0AVF1 554 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 BICDL2A1A5D9 508 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 ARL5CA6NH57 179 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 MYMKA6NI61 221 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 EIF3CLB5ME19 914 aaKnown RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 SLC16A4O15374 487 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 CALUO43852 315 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 KIF5CO60282 957 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 STX10O60499 249 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 ERLIN1O75477 346 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 GCNT3O95395 438 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 GALTP07902 379 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 LINC00271P0C7V0 271 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 MYBL2P10244 700 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 CTSAP10619 480 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 IDEP14735 1019 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 AGXTP21549 392 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 CTNNB1P35222 781 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 ASIC1P78348 528 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 LRRC63Q05C16 580 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 COASYQ13057 564 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 SMC1AQ14683 1233 aaKnown RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 KNOP1Q1ED39 458 aaKnown RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 USP41Q3LFD5 358 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 CLLU1OSQ5K130 101 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 SPOUT1Q5T280 376 aaKnown RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 NAIF1Q69YI7 327 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 FAM173BQ6P4H8 233 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 EPM2AIP1Q7L775 607 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 COLGALT2Q8IYK4 626 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 THNSL1Q8IYQ7 743 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 RNF168Q8IYW5 571 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 SYCP3Q8IZU3 236 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 FSIP1Q8NA03 581 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 APPL2Q8NEU8 664 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 MDGA1Q8NFP4 955 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 BEST2Q8NFU1 509 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 SLC35B2Q8TB61 432 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 SPPL3Q8TCT6 385 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 GPT2Q8TD30 523 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 JADE3Q92613 823 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 TAF4BQ92750 862 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 DHX58Q96C10 678 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 IGSF21Q96ID5 467 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 ZNF560Q96MR9 790 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 CDK5RAP1Q96SZ6 601 aaKnown RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 EIF3CQ99613 913 aaKnown RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 CDX2Q99626 313 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 SH2D3AQ9BRG2 576 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 CDT1Q9H211 546 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 KCNH6Q9H252 994 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 TTYH1Q9H313 450 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 PLEKHA4Q9H4M7 779 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 RMI1Q9H9A7 625 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 RPF1Q9H9Y2 349 aaKnown RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 BATF3Q9NR55 127 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 TYW1Q9NV66 732 aaKnown RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 CPSF3Q9UKF6 684 aaKnown RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 AGO2Q9UKV8 859 aaKnown RBP5.77□□□□□ -1.49
PFDN5-209ENST00000550069 SIK3Q9Y2K2 1263 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 BRWD1Q9NSI6 2320 aa5.77□□□□□ -1.49
PFDN5-209ENST00000550069 COL4A4P53420 1690 aaPredicted RBP5.76□□□□□ -1.49
PFDN5-209ENST00000550069 ANKRD62A6NC57 917 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 ZNF233A6NK53 670 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 GRXCR1A8MXD5 290 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 H7C4K7 107 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 PMM2O15305 246 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 EXTL3O43909 919 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 AKR1B10O60218 316 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 FGF18O76093 207 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 RECQL4O94761 1208 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 CAVIN2O95810 425 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 GNA14O95837 355 aa5.76□□□□□ -1.49
PFDN5-209ENST00000550069 PECAM1P16284 738 aaPredicted RBP5.76□□□□□ -1.49
PFDN5-209ENST00000550069 HOXA9P31269 272 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms