RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ZNF713Q8N859 430 aaPredicted RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 OR6Y1Q8NGX8 325 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 MAFAQ8NHW3 353 aaPredicted RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 EID2BQ96D98 161 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 NEIL1Q96FI4 390 aaPredicted RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 HIST1H2AAQ96QV6 131 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 HAPLN3Q96S86 360 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 SH3GLB2Q9NR46 395 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 NDRG4Q9ULP0 352 aaKnown RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 SUN1O94901 812 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 HEXIM1O94992 359 aaKnown RBP4.03□□□□□ -1.76
APAF1-208ENST00000549007 HOXC6P09630 235 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 MCM7P33993 719 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 RAC3P60763 192 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 NONOQ15233 471 aaKnown RBP eCLIP4.03□□□□□ -1.76
APAF1-208ENST00000549007 ELAVL1Q15717 326 aaKnown RBP4.03□□□□□ -1.76
APAF1-208ENST00000549007 TBCEQ15813 527 aaPredicted RBP4.03□□□□□ -1.76
APAF1-208ENST00000549007 INSCQ1MX18 579 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 TMEM196Q5HYL7 178 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 MAP3K21Q5TCX8 1036 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 ACAD10Q6JQN1 1059 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 MSANTD2Q6P1R3 559 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 NFRKBQ6P4R8 1299 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 REXO1L1PQ8IX06 675 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 SLC22A17Q8WUG5 538 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 SIGLEC10Q96LC7 697 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 ABHD16BQ9H3Z7 469 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 ADD3Q9UEY8 706 aaKnown RBP4.03□□□□□ -1.76
APAF1-208ENST00000549007 TBC1D29Q9UFV1 150 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 SLC13A4Q9UKG4 626 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 NAALADL1Q9UQQ1 740 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 MYADML2A6NDP7 307 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 CHMP2AO43633 222 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 CCNT1O60563 726 aaKnown RBP4.03□□□□□ -1.76
APAF1-208ENST00000549007 ATP9AO75110 1047 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 PGK1P00558 417 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 CYBAP13498 195 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 CCND2P30279 289 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 PBX1P40424 430 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 DGKEP52429 567 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 BEX3Q00994 111 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 TLE2Q04725 743 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 TRAF1Q13077 416 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 RESTQ13127 1097 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 ACVR2BQ13705 512 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 ERV3-1Q14264 604 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 MFSD14CQ5VZR4 134 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 FBXO46Q6PJ61 603 aaPredicted RBP4.03□□□□□ -1.76
APAF1-208ENST00000549007 ZFP28Q8NHY6 868 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 BICD2Q8TD16 824 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 RABGGTAQ92696 567 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 NELL1Q92832 810 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 TMEM125Q96AQ2 219 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 REEP2Q9BRK0 252 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 UNKLQ9H9P5 680 aaKnown RBP4.03□□□□□ -1.76
APAF1-208ENST00000549007 XPNPEP3Q9NQH7 507 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 ANKEF1Q9NU02 776 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 DNAJB11Q9UBS4 358 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 OAZ3Q9UMX2 235 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 TMEM98Q9Y2Y6 226 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 KIF3AQ9Y496 699 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 PCDHB2Q9Y5E7 798 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 PLXNA1Q9UIW2 1896 aa4.03□□□□□ -1.76
APAF1-208ENST00000549007 VWA3AA6NCI4 1184 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 ASB14A6NK59 587 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PJA2O43164 708 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CCL5P13501 91 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 APOBEC3AP31941 199 aaPredicted RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 NPTX2P47972 431 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 HARS2P49590 506 aaKnown RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 SOX10P56693 466 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 LRP8Q14114 963 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 ARHGEF6Q15052 776 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 STXBP2Q15833 593 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PREPLQ4J6C6 727 aaPredicted RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 RBM20Q5T481 1227 aaKnown RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 RAB11FIP2Q7L804 512 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PLA2G4DQ86XP0 818 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 NRSN1Q8IZ57 195 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CARFQ8N187 725 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 LCORQ96JN0 433 aaPredicted RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 DEFB118Q96PH6 123 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CCDC134Q9H6E4 229 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 TMEM8AQ9HCN3 771 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CTTNBP2NLQ9P2B4 639 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PIAS3Q9Y6X2 628 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 RBBP6Q7Z6E9 1792 aaKnown RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 A0A087WWV3 80 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 M0QZQ0 153 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PEX12O00623 359 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PPM1DO15297 605 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CCNT2O60583 730 aaKnown RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 CD72P21854 359 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 UBA1P22314 1058 aaKnown RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 DRG2P55039 364 aaKnown RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 GHRHRQ02643 423 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PRKG2Q13237 762 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 ITGB3BPQ13352 177 aaPredicted RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 BFSP2Q13515 415 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 FAM69AQ5T7M9 428 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms