RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 DCAF4L2Q8NA75 395 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 TPCN2Q8NHX9 752 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 MAPK15Q8TD08 544 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 TTC9Q92623 222 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 CCDC97Q96F63 343 aaPredicted RBP27.42■■□□□ 1.98
CHFR-218ENST00000540963 NOX5Q96PH1 765 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 PSMB7Q99436 277 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 FZD3Q9NPG1 666 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 TMEM51Q9NW97 253 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 COX16Q9P0S2 106 aa27.42■■□□□ 1.98
CHFR-218ENST00000540963 COL27A1Q8IZC6 1860 aaPredicted RBP27.42■■□□□ 1.98
CHFR-218ENST00000540963 BICDL2A1A5D9 508 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 H3BM21 787 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 PAGE1O75459 146 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 CSF2P04141 144 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 NME1P15531 152 aaKnown RBP27.41■■□□□ 1.98
CHFR-218ENST00000540963 CLDN2P57739 230 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 RPS21P63220 83 aaKnown RBP27.41■■□□□ 1.98
CHFR-218ENST00000540963 ACBD5Q5T8D3 534 aaPredicted RBP27.41■■□□□ 1.98
CHFR-218ENST00000540963 KIAA1161Q6NSJ0 714 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 IFI44Q8TCB0 444 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 PPP1R13BQ96KQ4 1090 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 CPXM1Q96SM3 734 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 DNAJC28Q9NX36 388 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 RRN3Q9NYV6 651 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 VPS51Q9UID3 782 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 PCDHGA8Q9Y5G5 932 aa27.41■■□□□ 1.98
CHFR-218ENST00000540963 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.41■■□□□ 1.98
CHFR-218ENST00000540963 RHOCP08134 193 aa27.4■■□□□ 1.98
CHFR-218ENST00000540963 C6P13671 934 aa27.4■■□□□ 1.98
CHFR-218ENST00000540963 CD44P16070 742 aaKnown RBP27.4■■□□□ 1.98
CHFR-218ENST00000540963 NOS2P35228 1153 aa27.4■■□□□ 1.98
CHFR-218ENST00000540963 SNX16P57768 344 aa27.4■■□□□ 1.98
CHFR-218ENST00000540963 SKOR1P84550 965 aa27.4■■□□□ 1.98
CHFR-218ENST00000540963 NME3Q13232 169 aa27.4■■□□□ 1.98
CHFR-218ENST00000540963 C11orf57Q6ZUT1 292 aaPredicted RBP27.4■■□□□ 1.98
CHFR-218ENST00000540963 ELOA2Q8IYF1 753 aaPredicted RBP27.4■■□□□ 1.98
CHFR-218ENST00000540963 WDTC1Q8N5D0 677 aa27.4■■□□□ 1.98
CHFR-218ENST00000540963 VCPIP1Q96JH7 1222 aa27.4■■□□□ 1.98
CHFR-218ENST00000540963 BMFQ96LC9 184 aa27.4■■□□□ 1.98
CHFR-218ENST00000540963 IL36AQ9UHA7 158 aa27.4■■□□□ 1.98
CHFR-218ENST00000540963 SPTY2D1-AS1A0A0U1RR47 76 aa27.39■■□□□ 1.98
CHFR-218ENST00000540963 B8ZZF3 427 aa27.39■■□□□ 1.98
CHFR-218ENST00000540963 RBMS1P29558 406 aaKnown RBP27.39■■□□□ 1.98
CHFR-218ENST00000540963 MLLT3P42568 568 aaPredicted RBP27.39■■□□□ 1.98
CHFR-218ENST00000540963 RECQLP46063 649 aaPredicted RBP27.39■■□□□ 1.98
CHFR-218ENST00000540963 BRMS1LQ5PSV4 323 aa27.39■■□□□ 1.98
CHFR-218ENST00000540963 SEL1L3Q68CR1 1132 aa27.39■■□□□ 1.98
CHFR-218ENST00000540963 PTAR1Q7Z6K3 402 aaPredicted RBP27.39■■□□□ 1.98
CHFR-218ENST00000540963 C14orf80Q86SX3 495 aa27.39■■□□□ 1.98
CHFR-218ENST00000540963 PARGQ86W56 976 aa27.39■■□□□ 1.98
CHFR-218ENST00000540963 ZNF548Q8NEK5 533 aaPredicted RBP27.39■■□□□ 1.98
CHFR-218ENST00000540963 SLC46A1Q96NT5 459 aa27.39■■□□□ 1.98
CHFR-218ENST00000540963 SLC17A9Q9BYT1 436 aa27.39■■□□□ 1.98
CHFR-218ENST00000540963 SALL4Q9UJQ4 1053 aa27.39■■□□□ 1.98
CHFR-218ENST00000540963 PCDHGC3Q9UN70 934 aa27.39■■□□□ 1.98
CHFR-218ENST00000540963 DOCK4Q8N1I0 1966 aa27.39■■□□□ 1.97
CHFR-218ENST00000540963 MYO18BQ8IUG5 2567 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 GOLGA6L4A6NEF3 574 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 K7ERQ8 282 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 TPP1O14773 563 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 SNAP91O60641 907 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 DAB1O75553 588 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 RABIFP47224 123 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 NEK3P51956 506 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 FZD2Q14332 565 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 C22orf39Q6P5X5 142 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 OLFML1Q6UWY5 402 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 SLC26A9Q7LBE3 791 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 ZNF397Q8NF99 534 aaPredicted RBP27.38■■□□□ 1.97
CHFR-218ENST00000540963 FEM1CQ96JP0 617 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 SIK2Q9H0K1 926 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 OSBPL2Q9H1P3 480 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 ARHGEF38Q9NXL2 777 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 SATB2Q9UPW6 733 aa27.38■■□□□ 1.97
CHFR-218ENST00000540963 EME2A4GXA9 379 aaPredicted RBP27.37■■□□□ 1.97
CHFR-218ENST00000540963 M0QYT0 321 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 AP1G1O43747 822 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 TCEA3O75764 348 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 CNTN5O94779 1100 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 RRM1P23921 792 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 ARSIQ5FYB1 569 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 ZNF683Q8IZ20 524 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 CHST14Q8NCH0 376 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 NELFBQ8WX92 580 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 LENG8Q96PV6 779 aaPredicted RBP27.37■■□□□ 1.97
CHFR-218ENST00000540963 CEP44Q9C0F1 390 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 ACP6Q9NPH0 428 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 PAXBP1Q9Y5B6 917 aa27.37■■□□□ 1.97
CHFR-218ENST00000540963 POM121BA6NF01 834 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 DRGXA6NNA5 263 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 K7ENP7 123 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 SMAD6O43541 496 aaKnown RBP27.36■■□□□ 1.97
CHFR-218ENST00000540963 LEFTY1O75610 366 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 GRAP2O75791 330 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 NEBLO76041 1014 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 MYF5P13349 255 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 TGM2P21980 687 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 ITGB7P26010 798 aa27.36■■□□□ 1.97
CHFR-218ENST00000540963 GGCXP38435 758 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms