RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ZNF560Q96MR9 790 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 SYT17Q9BSW7 474 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 KATNBL1Q9H079 304 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 WDR41Q9HAD4 459 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 CDHR5Q9HBB8 845 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 ZBTB26Q9HCK0 441 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 ACSS2Q9NR19 701 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 RUVBL2Q9Y230 463 aaKnown RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 PDLIM1O00151 329 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 CFLARO15519 480 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 BCAS2O75934 225 aaPredicted RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 RECQL4O94761 1208 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 TPH1P17752 444 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 NMBRP28336 390 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 ART3Q13508 389 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 INTS6LQ5JSJ4 861 aaKnown RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 ARMC3Q5W041 872 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 NOTUMQ6P988 496 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 ZC3HC1Q86WB0 502 aaKnown RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 LSMEM2Q8N112 164 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 RNF169Q8NCN4 708 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 BHLHE22Q8NFJ8 381 aaPredicted RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 STYXQ8WUJ0 223 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 ZFRQ96KR1 1074 aaKnown RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 MRPS26Q9BYN8 205 aaKnown RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 RHOJQ9H4E5 214 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 ZNF696Q9H7X3 374 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 LRRC4Q9HBW1 653 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 VTA1Q9NP79 307 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 MAGED2Q9UNF1 606 aaPredicted RBP12.49□□□□□ -0.41
NPC1-202ENST00000540608 AP4B1Q9Y6B7 739 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 SBF1O95248 1867 aa12.49□□□□□ -0.41
NPC1-202ENST00000540608 SMIM28A0A1B0GU29 152 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 PRSS51A0A1B0GVH4 220 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 TARM1B6A8C7 271 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 AP3B1O00203 1094 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 BEST1O76090 585 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 SRGAP2BP0DMP2 458 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 COL6A2P12110 1019 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 ENO3P13929 434 aaPredicted RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 NPR3P17342 541 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 AKAP5P24588 427 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 MSX2P35548 267 aaPredicted RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 DPP6P42658 865 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 TAF6P49848 677 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 PKNOX1P55347 436 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 TPI1P60174 286 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 SCAPQ12770 1279 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 SLC12A1Q13621 1099 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 USP10Q14694 798 aaKnown RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
NPC1-202ENST00000540608 LILRA2Q8N149 483 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 CNTD1Q8N815 330 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 HDAC11Q96DB2 347 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 SCYL1Q96KG9 808 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 CATSPER2Q96P56 530 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 VAT1Q99536 393 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 APBA2Q99767 749 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 APOL2Q9BQE5 337 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 UBE2OQ9C0C9 1292 aaKnown RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 NXF3Q9H4D5 531 aaKnown RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 PTTG2Q9NZH5 202 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 RBM47A0AV96 593 aaKnown RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 GOLGA8TH3BQL2 631 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 CLDN5O00501 218 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 ACOT8O14734 319 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 HUS1O60921 280 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 TNFAIP8O95379 198 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 SNAI1O95863 264 aaPredicted RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 FYNP06241 537 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 NFKB1P19838 968 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 HSPA13P48723 471 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 ZBTB17Q13105 803 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 TMEM198Q66K66 360 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 NXNQ6DKJ4 435 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 RBM44Q6ZP01 1051 aaKnown RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 HFE2Q6ZVN8 426 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 SIX6OS1Q8N1H7 587 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 NPWQ8N729 165 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 ADAM32Q8TC27 787 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 PDCD6IPQ8WUM4 868 aaKnown RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 EZH1Q92800 747 aaPredicted RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 USP13Q92995 863 aaPredicted RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 PKP2Q99959 881 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 KIFC1Q9BW19 673 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 FAM49AQ9H0Q0 323 aaPredicted RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 WDR6Q9NNW5 1121 aaKnown RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 ANLNQ9NQW6 1124 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 PCDHGB4Q9UN71 923 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 GNEQ9Y223 722 aaKnown RBP12.48□□□□□ -0.41
NPC1-202ENST00000540608 PCDHGB5Q9Y5G0 923 aa12.48□□□□□ -0.41
NPC1-202ENST00000540608 UNCXA6NJT0 531 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 PHGDHO43175 533 aaKnown RBP12.47□□□□□ -0.41
NPC1-202ENST00000540608 SPATA31D3P0C874 917 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 SLC35E2BP0CK96 405 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 SMPD1P17405 629 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 SAT1P21673 171 aa12.47□□□□□ -0.41
NPC1-202ENST00000540608 WARSP23381 471 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms