RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 SMG7Q92540 1137 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SLC39A3Q9BRY0 314 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RTKNQ9BST9 563 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 GPR63Q9BZJ6 419 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TAF6LQ9Y6J9 622 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TET1Q8NFU7 2136 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 GLI2P10070 1586 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 KBTBD13C9JR72 458 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 TBX1O43435 398 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 YES1P07947 543 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RARBP10826 455 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 NOS3P29474 1203 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 GRK4P32298 578 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SMCO1Q147U7 214 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 CCNG2Q16589 344 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 NT5DC3Q86UY8 548 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SLC22A16Q86VW1 577 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 GALNT12Q8IXK2 581 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 FRMD6Q96NE9 622 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 MED15Q96RN5 788 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 GRHL1Q9NZI5 618 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 COG5Q9UP83 839 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 IQGAP3Q86VI3 1631 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 CYP2C9P11712 490 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 NCK1P16333 377 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 EIF4BP23588 611 aaKnown RBP5.74□□□□□ -1.49
CSMD1-215ENST00000537824 CSHL1Q14406 222 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 SYCE2Q6PIF2 218 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 RAB2BQ8WUD1 216 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF112Q9UJU3 913 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 VANGL2Q9ULK5 521 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 PCDHGC5Q9Y5F6 944 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 KIAA1210Q9ULL0 1709 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 ABCA8O94911 1581 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ABCA9Q8IUA7 1624 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CYP7B1O75881 506 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 GH2P01242 217 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 HIST1H2AGP0C0S8 130 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ITIH1P19827 911 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 HIST1H2ADP20671 130 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CDH15P55291 814 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CYP4F8P98187 520 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 RBM15BQ8NDT2 890 aaKnown RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ADCY4Q8NFM4 1077 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SLC47A1Q96FL8 570 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 HIST1H2AHQ96KK5 128 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 HIST1H2AJQ99878 128 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 H2AFJQ9BTM1 129 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 EMILIN2Q9BXX0 1053 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 MAGEE1Q9HCI5 957 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TBCCD1Q9NVR7 557 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 HPF1Q9NWY4 346 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 NKIRAS2Q9NYR9 191 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SNX9Q9Y5X1 595 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ABCA6Q8N139 1617 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SPG11Q96JI7 2443 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SH3D21A4FU49 640 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 FOXO6A8MYZ6 492 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TRIM3O75382 744 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 PPM1BO75688 479 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 MAGEA12P43365 314 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 HERC3Q15034 1050 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CTC1Q2NKJ3 1217 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ULK3Q6PHR2 472 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 Q96MT0 163 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 NPAS2Q99743 824 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CHIAQ9BZP6 476 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SAV1Q9H4B6 383 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 GNEQ9Y223 722 aaKnown RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SAMD9LQ8IVG5 1584 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 MGAT4DA6NG13 374 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 VPS72Q15906 364 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TTC23LQ6PF05 361 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ADGRF4Q8IZF3 695 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ING5Q8WYH8 240 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SPOCK2Q92563 424 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 OSBPL7Q9BZF2 842 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 PNPLA8Q9NP80 782 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 AGPAT3Q9NRZ7 376 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TJP2Q9UDY2 1190 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 PADI4Q9UM07 663 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 MADDQ8WXG6 1647 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 CHURC1-FNTBB4DL54 471 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 OR7A10O76100 309 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SNRPB2P08579 225 aaKnown RBP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 IL18Q14116 193 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 DCAF15Q66K64 600 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF470Q6ECI4 717 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 DEF8Q6ZN54 512 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 IGDCC4Q8TDY8 1250 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TMEM143Q96AN5 459 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 NMUR2Q9GZQ4 415 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 SLITRK2Q9H156 845 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 ACTR8Q9H981 624 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 PIDD1Q9HB75 910 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 PRAMEF22A3QJZ6 481 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 GSG1L2A8MUP6 293 aa5.73□□□□□ -1.49
CSMD1-215ENST00000537824 EIF3DO15371 548 aaKnown RBP eCLIP5.73□□□□□ -1.49
CSMD1-215ENST00000537824 TEX28O15482 410 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms