RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PPM1NQ8N819 430 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 TTLQ8NG68 377 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 OR7A2PQ8NGA2 310 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 LRRC20Q8TCA0 184 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 LHPPQ9H008 270 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 UPF3AQ9H1J1 476 aaKnown RBP8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 IFT22Q9H7X7 185 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 TIGARQ9NQ88 270 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 ABCB10Q9NRK6 738 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 PNPOQ9NVS9 261 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 SMIM22K7EJ46 135 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 TOR1BO14657 336 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 IL18RAPO95256 599 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 TDP2O95551 362 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 KRT20P35900 424 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 SERPINH1P50454 418 aaKnown RBP8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 PLA2G16P53816 162 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 FMO1Q01740 532 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 YIF1BQ5BJH7 314 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 DESI1Q6ICB0 168 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 GATAD2AQ86YP4 633 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 RCOR2Q8IZ40 523 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 LEMD2Q8NC56 503 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 SHCBP1Q8NEM2 672 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 CPT1BQ92523 772 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 NKD2Q969F2 451 aaPredicted RBP8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 RCN3Q96D15 328 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 MBOAT7Q96N66 472 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 MMP19Q99542 508 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 FUNDC2Q9BWH2 189 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 TMEM117Q9H0C3 514 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 ZBTB3Q9H5J0 574 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 PNPLA8Q9NP80 782 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 ADA2Q9NZK5 511 aa8.65□□□□□ -1.02
SRGAP1-202ENST00000537556 SPATA31A6Q5VVP1 1343 aa8.65□□□□□ -1.03
SRGAP1-202ENST00000537556 LRP5O75197 1615 aa8.65□□□□□ -1.03
SRGAP1-202ENST00000537556 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ACSL4O60488 711 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 SEC24AO95486 1093 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 CAPGP40121 348 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 CACNB3P54284 484 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 SLC12A3P55017 1021 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 FSTL1Q12841 308 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 NFE2L1Q14494 772 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 PLA2G4EQ3MJ16 856 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 VWA5B1Q5TIE3 1220 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 PLA2G4FQ68DD2 849 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 SDE2Q6IQ49 451 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 EPGNQ6UW88 154 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 POLNQ7Z5Q5 900 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 FAM71AQ8IYT1 594 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 CCDC185Q8N715 623 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 PHF10Q8WUB8 498 aaKnown RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 SH3KBP1Q96B97 665 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 VCPIP1Q96JH7 1222 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ASB2Q96Q27 587 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 TEX13BQ9BXU2 312 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ANKHQ9HCJ1 492 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 RAB20Q9NX57 234 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 MCM9Q9NXL9 1143 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 HCN4Q9Y3Q4 1203 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 RAD54BQ9Y620 910 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 DOCK2Q92608 1830 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 TCRBV3S1A0A5B6 114 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 C9IYK1 514 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 USP17L12C9JPN9 530 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 KBTBD13C9JR72 458 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 USP17L21D6R901 530 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 H0YIN7 160 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ZNF195O14628 629 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 VAPBO95292 243 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 GH2P01242 217 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 TRIM49P0CI25 452 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 TRIM49CP0CI26 452 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 FGF3P11487 239 aaPredicted RBP8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 AKR1B1P15121 316 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 KCNA6P17658 529 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 DDOSTP39656 456 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ELK3P41970 407 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 DEFA1P59665 94 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 DEFA3P59666 94 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 OLR1P78380 273 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 RHAGQ02094 409 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 AQP6Q13520 282 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ARHGEF16Q5VV41 709 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 UTS2BQ765I0 119 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 PLPP6Q8IY26 295 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 ADGRG5Q8IZF4 528 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 TMEM35BQ8NCS4 154 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 APPL2Q8NEU8 664 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 PROX1Q92786 737 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 RIPOR3Q96MK2 946 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 TWNKQ96RR1 684 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 LRRC40Q9H9A6 602 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 COG4Q9H9E3 785 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 IL17RBQ9NRM6 502 aa8.64□□□□□ -1.03
SRGAP1-202ENST00000537556 CNOT6Q9ULM6 557 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms