RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PTK2BQ14289 1009 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 DPCR1Q3MIW9 517 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 ALFQ53S48 1182 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 CARD16Q5EG05 197 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 TCP11X2Q5H9J9 407 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 LINGO4Q6UY18 593 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 ARCQ7LC44 396 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 C14orf80Q86SX3 495 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 FAM131BQ86XD5 332 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 XYLT1Q86Y38 959 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 OR2A12Q8NGT7 310 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 CPA5Q8WXQ8 436 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 RAB7BQ96AH8 199 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 SELENOOQ9BVL4 669 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 OSBPL1AQ9BXW6 950 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 NRSN2Q9GZP1 204 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 TNKS2Q9H2K2 1166 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 ZDHHC6Q9H6R6 413 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 EBF2Q9HAK2 575 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 USP29Q9HBJ7 922 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 METTL5Q9NRN9 209 aaKnown RBP13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 DNAJC28Q9NX36 388 aa13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 PPARGC1AQ9UBK2 798 aaKnown RBP13.52□□□□□ -0.25
CLSTN3-205ENST00000535452 CXorf51AA0A1B0GTR3 108 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 ZSCAN5CA6NGD5 496 aaPredicted RBP13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 F8VZ95 297 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 TAF4O00268 1085 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 FFAR2O15552 330 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 TSPAN6O43657 245 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 RAMP2O60895 175 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 LEFTY1O75610 366 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 GFPT2O94808 682 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 ITGB7P26010 798 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 RABIFP47224 123 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 MAPKAPK2P49137 400 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 THOP1P52888 689 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 TARDBPQ13148 414 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 PIP5KL1Q5T9C9 394 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 BROXQ5VW32 411 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 SASS6Q6UVJ0 657 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 LSMEM2Q8N112 164 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 OR7D4Q8NG98 312 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 KLK6Q92876 244 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 ALG14Q96F25 216 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 IFT43Q96FT9 208 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 CFAP57Q96MR6 1250 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 DEPDC7Q96QD5 511 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 NCAPGQ9BPX3 1015 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 SLC17A9Q9BYT1 436 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 SIX2Q9NPC8 291 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 ARHGAP20Q9P2F6 1191 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 HECAQ9UBI9 543 aaPredicted RBP13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 OR12D3Q9UGF7 316 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 OR51B4Q9Y5P0 310 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 HS3ST3A1Q9Y663 406 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 IGF2RP11717 2491 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 NUMA1Q14980 2115 aa13.51□□□□□ -0.25
CLSTN3-205ENST00000535452 IGLV3-10A0A075B6K4 115 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 A0A0D9SEW6 157 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 MT-CO1P00395 513 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 CALB1P05937 261 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 MMEP08473 750 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 KRT3P12035 628 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 ADRB3P13945 408 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 RHOQP17081 205 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 ACP1P24666 158 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 L1CAMP32004 1257 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 RPIAP49247 311 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 CCNHP51946 323 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 POLR2FP61218 127 aaKnown RBP13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 CDR2Q01850 454 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 COL9A2Q14055 689 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 EFHC2Q5JST6 749 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 SFMBT2Q5VUG0 894 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 PPP1R2P3Q6NXS1 205 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 DPY19L3Q6ZPD9 716 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 PARGQ86W56 976 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 IRF2BP1Q8IU81 584 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 NEK11Q8NG66 645 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 BTN2A2Q8WVV5 523 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 NT5C3BQ969T7 300 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 FAM131CQ96AQ9 280 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 TBC1D31Q96DN5 1066 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 GBP4Q96PP9 640 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 MAGEH1Q9H213 219 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 VPS16Q9H269 839 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 FAM207AQ9NSI2 230 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 TAB2Q9NYJ8 693 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 DOLKQ9UPQ8 538 aa13.5□□□□□ -0.25
CLSTN3-205ENST00000535452 PLXNA2O75051 1894 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 COL5A1P20908 1838 aaPredicted RBP13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 K7ERQ8 282 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 KRIT1O00522 736 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 WNT9AO14904 365 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 SIGLEC6O43699 453 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 POP4O95707 220 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 IGSF6O95976 241 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 DGKAP23743 735 aa13.49□□□□□ -0.25
CLSTN3-205ENST00000535452 SOX5P35711 763 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms