RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 SPATA31D4Q6ZUB0 917 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 C4orf33Q8N1A6 199 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 GALNT4Q8N4A0 578 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 TRIB2Q92519 343 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 RNF157Q96PX1 679 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 GOLGA2P5Q9HBQ8 144 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 KIF17Q9P2E2 1029 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 TBC1D30Q9Y2I9 924 aa11.43□□□□□ -0.58
AMBRA1-211ENST00000533727 NCANO14594 1321 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 PITPNM1O00562 1244 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 ZCCHC18P0CG32 403 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 CCNB1P14635 433 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 TTPAP49638 278 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 USP4Q13107 963 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 MAD2L1Q13257 205 aaPredicted RBP11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 TRIP4Q15650 581 aaPredicted RBP11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 AASDHQ4L235 1098 aaPredicted RBP11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 TRAF7Q6Q0C0 670 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 KCNMB4Q86W47 210 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 MDM1Q8TC05 714 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 MCRS1Q96EZ8 462 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 FUCA2Q9BTY2 467 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 ACTR8Q9H981 624 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 MAPRE3Q9UPY8 281 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 CAPN6Q9Y6Q1 641 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 CLDN5O00501 218 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 HSD17B3P37058 310 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 CDH4P55283 916 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 LRRC32Q14392 662 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 ECM1Q16610 540 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 SDHAF4Q5VUM1 108 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 SLC26A9Q7LBE3 791 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 FEM1CQ96JP0 617 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 ASB2Q96Q27 587 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 CPNE1Q99829 537 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 NRDE2Q9H7Z3 1164 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 CATSPERZQ9NTU4 200 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 NCKIPSDQ9NZQ3 722 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 SLC27A6Q9Y2P4 619 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 KCNK1O00180 336 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 AKAP10O43572 662 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 GPC1P35052 558 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 CAP1Q01518 475 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 BOP1Q14137 746 aaKnown RBP11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 CMTR2Q8IYT2 770 aaKnown RBP11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 SPATA20Q8TB22 786 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 FNIP1Q8TF40 1166 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 STARD8Q92502 1023 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 KAT5Q92993 513 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 ACDQ96AP0 544 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 SPATA17Q96L03 361 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 RUVBL2Q9Y230 463 aaKnown RBP11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 AP4S1Q9Y587 144 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 PER2O15055 1255 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 ENO3P13929 434 aaPredicted RBP11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 GRK2P25098 689 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 FMO1Q01740 532 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 SGO1Q5FBB7 561 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 DOK6Q6PKX4 331 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 CASKIN2Q8WXE0 1202 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 NEUROG2Q9H2A3 272 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 UBP1Q9NZI7 540 aa11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 TNPO3Q9Y5L0 923 aaKnown RBP11.42□□□□□ -0.58
AMBRA1-211ENST00000533727 PTPRJQ12913 1337 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 GCATO75600 419 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 ATP6V1G2O95670 118 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 RB1P06400 928 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 TACR2P21452 398 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 SOAT1P35610 550 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 C15orf59Q2T9L4 293 aaPredicted RBP11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 C16orf89Q6UX73 402 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 CHST9Q7L1S5 443 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 NKAPQ8N5F7 415 aaKnown RBP11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 SLC22A17Q8WUG5 538 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 MGAT4DA6NG13 374 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 TMEM114B3SHH9 223 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 TRDMT1O14717 391 aaKnown RBP11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 CHADO15335 359 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 PAGE1O75459 146 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 KCNE1P15382 129 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 DDX39BQ13838 428 aaKnown RBP11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 PDGFRLQ15198 375 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 MAGEH1Q9H213 219 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 CAAP1Q9H8G2 361 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 DTNAQ9Y4J8 743 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 PCDHB9Q9Y5E1 797 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 LAMB4A4D0S4 1761 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 KDM3BQ7LBC6 1761 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 A0A1B0GW55 424 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 DUX4L2P0CJ85 424 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 DUX4L3P0CJ86 424 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 DUX4L4P0CJ87 422 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 DUX4L5P0CJ88 424 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 DUX4L6P0CJ89 424 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 DUX4L7P0CJ90 424 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 ERCC2P18074 760 aa11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 SP100P23497 879 aaPredicted RBP11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 TARSP26639 723 aaKnown RBP11.41□□□□□ -0.58
AMBRA1-211ENST00000533727 ADRA1BP35368 520 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms