RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 NEURL1O76050 574 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 RNF8O76064 485 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 FGBP02675 491 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 CD63P08962 238 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 CKMT1AP12532 417 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 TFEBP19484 476 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 ARL4CP56559 192 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 HNRNPA0Q13151 305 aaKnown RBP2.87□□□□□ -1.95
PTPN11-203ENST00000530818 PRKG1Q13976 671 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 DHX8Q14562 1220 aaKnown RBP2.87□□□□□ -1.95
PTPN11-203ENST00000530818 PDCD2Q16342 344 aaPredicted RBP2.87□□□□□ -1.95
PTPN11-203ENST00000530818 SMTNL2Q2TAL5 461 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 LEXMQ3ZCV2 418 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 GLE1Q53GS7 698 aaKnown RBP2.87□□□□□ -1.95
PTPN11-203ENST00000530818 ARL13AQ5H913 290 aaPredicted RBP2.87□□□□□ -1.95
PTPN11-203ENST00000530818 ANO7Q6IWH7 933 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 SLC30A9Q6PML9 568 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 SHC4Q6S5L8 630 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 UNC5CLQ8IV45 518 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 UEVLDQ8IX04 471 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 ADGRF4Q8IZF3 695 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 NANOGP1Q8N7R0 232 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 LINS1Q8NG48 757 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 PRSS3P2Q8NHM4 247 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 SCARB1Q8WTV0 552 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 CPT1BQ92523 772 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 SDCCAG3Q96C92 435 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 ZFYVE19Q96K21 471 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 PAGR1Q9BTK6 254 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 TRIM2Q9C040 744 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 ERVK-5Q9HDB9 667 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 Q9N2J8 555 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 ZBTB40Q9NUA8 1239 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 TMEM248Q9NWD8 314 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 HDAC6Q9UBN7 1215 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 KLQ9UEF7 1012 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 AGO2Q9UKV8 859 aaKnown RBP2.87□□□□□ -1.95
PTPN11-203ENST00000530818 PCDHA12Q9UN75 941 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 LAMP3Q9UQV4 416 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 THSD7AQ9UPZ6 1657 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 CCDC88AQ3V6T2 1871 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 COL18A1P39060 1754 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 ROCK1Q13464 1354 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 PIK3R4Q99570 1358 aa2.87□□□□□ -1.95
PTPN11-203ENST00000530818 BTAF1O14981 1849 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 VIRMAQ69YN4 1812 aaKnown RBP2.86□□□□□ -1.95
PTPN11-203ENST00000530818 DCCP43146 1447 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 PTCH1Q13635 1447 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 YTHDC2Q9H6S0 1430 aaKnown RBP2.86□□□□□ -1.95
PTPN11-203ENST00000530818 RRBP1Q9P2E9 1410 aaKnown RBP2.86□□□□□ -1.95
PTPN11-203ENST00000530818 TOPAZ1Q8N9V7 1692 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 QRICH2Q9H0J4 1663 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 STX16-NPEPL1H3BU86 382 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 STX16O14662 325 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 DHX16O60231 1041 aaKnown RBP2.86□□□□□ -1.95
PTPN11-203ENST00000530818 EPN2O95208 641 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 TFRCP02786 760 aaKnown RBP2.86□□□□□ -1.95
PTPN11-203ENST00000530818 TK1P04183 234 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 PKMP14618 531 aaKnown RBP2.86□□□□□ -1.95
PTPN11-203ENST00000530818 HOXB9P17482 250 aaPredicted RBP2.86□□□□□ -1.95
PTPN11-203ENST00000530818 TYK2P29597 1187 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 MMP13P45452 471 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 MVDP53602 400 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 SLC12A2P55011 1212 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 NUGGCQ68CJ6 796 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 SYNE3Q6ZMZ3 975 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 CPOQ8IVL8 374 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 SCN4BQ8IWT1 228 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 AFG1LQ8WV93 481 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 THAP4Q8WY91 577 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 CCT6BQ92526 530 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 KCNJ9Q92806 393 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 VCPIP1Q96JH7 1222 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 PRAM1Q96QH2 718 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 PIGSQ96S52 555 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 CLSTN3Q9BQT9 956 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 ISCA1Q9BUE6 129 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 CLPBQ9H078 707 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 AAMDCQ9H7C9 122 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 SAYSD1Q9NPB0 183 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 PAPOLBQ9NRJ5 636 aaKnown RBP2.86□□□□□ -1.95
PTPN11-203ENST00000530818 THSD1Q9NS62 852 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 COG5Q9UP83 839 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 CASZ1Q86V15 1759 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 ZNF521Q96K83 1311 aa2.86□□□□□ -1.95
PTPN11-203ENST00000530818 HFM1A2PYH4 1435 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 TECPR2O15040 1411 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 TNS3Q68CZ2 1445 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 SPATA31E1Q6ZUB1 1445 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 GOLGB1Q14789 3259 aaKnown RBP2.85□□□□□ -1.95
PTPN11-203ENST00000530818 PEAK1Q9H792 1746 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 ITGB4P16144 1822 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 TRBV5-7A0A0A0MS05 114 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 FOXO6A8MYZ6 492 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 PRPF4O43172 522 aaKnown RBP eCLIP2.85□□□□□ -1.95
PTPN11-203ENST00000530818 CHRNB1P11230 501 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 RXRAP19793 462 aa2.85□□□□□ -1.95
PTPN11-203ENST00000530818 AARSP49588 968 aaKnown RBP eCLIP2.85□□□□□ -1.95
PTPN11-203ENST00000530818 RBM5P52756 815 aaKnown RBP eCLIP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms