RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 AEBP2Q6ZN18 517 aaPredicted RBP14.5□□□□□ -0.09
PTPN11-203ENST00000530818 CHIC1Q5VXU3 224 aa14.1□□□□□ -0.15
PTPN11-203ENST00000530818 PHF23Q9BUL5 403 aaPredicted RBP12.51□□□□□ -0.41
PTPN11-203ENST00000530818 SENP3Q9H4L4 574 aaPredicted RBP12.12□□□□□ -0.47
PTPN11-203ENST00000530818 PLPPR3Q6T4P5 718 aa11.4□□□□□ -0.58
PTPN11-203ENST00000530818 FOXD1Q16676 465 aa11.36□□□□□ -0.59
PTPN11-203ENST00000530818 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
PTPN11-203ENST00000530818 ADRA2BP18089 450 aa10.97□□□□□ -0.65
PTPN11-203ENST00000530818 PIAS4Q8N2W9 510 aaPredicted RBP10.63□□□□□ -0.71
PTPN11-203ENST00000530818 MSH5O43196 834 aa10.32□□□□□ -0.76
PTPN11-203ENST00000530818 PPP4R3CPQ6ZMV5 832 aa10.11□□□□□ -0.79
PTPN11-203ENST00000530818 POTEDQ86YR6 584 aa10.04□□□□□ -0.8
PTPN11-203ENST00000530818 MAPK8IP2Q13387 824 aaPredicted RBP10□□□□□ -0.81
PTPN11-203ENST00000530818 KCNA4P22459 653 aa9.96□□□□□ -0.82
PTPN11-203ENST00000530818 SCAF1Q9H7N4 1312 aaKnown RBP9.86□□□□□ -0.83
PTPN11-203ENST00000530818 CNKSR2Q8WXI2 1034 aa9.78□□□□□ -0.84
PTPN11-203ENST00000530818 NCBP3Q53F19 620 aaKnown RBP9.74□□□□□ -0.85
PTPN11-203ENST00000530818 NPM3O75607 178 aaKnown RBP9.73□□□□□ -0.85
PTPN11-203ENST00000530818 DMRT2Q9Y5R5 561 aa9.73□□□□□ -0.85
PTPN11-203ENST00000530818 RNF216Q9NWF9 866 aaPredicted RBP9.59□□□□□ -0.87
PTPN11-203ENST00000530818 HOXD11P31277 338 aaPredicted RBP9.57□□□□□ -0.88
PTPN11-203ENST00000530818 DNAJC5BQ9UF47 199 aa9.43□□□□□ -0.9
PTPN11-203ENST00000530818 SLC4A1APQ9BWU0 796 aaKnown RBP9.42□□□□□ -0.9
PTPN11-203ENST00000530818 DCAF8L1A6NGE4 600 aa9.24□□□□□ -0.93
PTPN11-203ENST00000530818 ZBTB22O15209 634 aa9.23□□□□□ -0.93
PTPN11-203ENST00000530818 SLC4A2P04920 1241 aa9.23□□□□□ -0.93
PTPN11-203ENST00000530818 EHMT2Q96KQ7 1210 aa9.22□□□□□ -0.93
PTPN11-203ENST00000530818 CSRNP3Q8WYN3 585 aa9.18□□□□□ -0.94
PTPN11-203ENST00000530818 FOXD4L1Q9NU39 408 aa9.07□□□□□ -0.96
PTPN11-203ENST00000530818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.04□□□□□ -0.969e-7■□□□□ 8.5
PTPN11-203ENST00000530818 U3KPZ7 1027 aaPredicted RBP8.99□□□□□ -0.97
PTPN11-203ENST00000530818 RNF39Q9H2S5 420 aa8.94□□□□□ -0.98
PTPN11-203ENST00000530818 MYCNP04198 464 aaPredicted RBP8.9□□□□□ -0.98
PTPN11-203ENST00000530818 ATF5Q9Y2D1 282 aaPredicted RBP8.83□□□□□ -1
PTPN11-203ENST00000530818 C1QBPQ07021 282 aaKnown RBP8.77□□□□□ -1.01
PTPN11-203ENST00000530818 ATXN8OSP0DMR3 200 aa8.74□□□□□ -1.01
PTPN11-203ENST00000530818 SAMD1Q6SPF0 538 aaPredicted RBP8.74□□□□□ -1.01
PTPN11-203ENST00000530818 SPINK5Q9NQ38 1064 aaPredicted RBP8.74□□□□□ -1.01
PTPN11-203ENST00000530818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.73□□□□□ -1.01
PTPN11-203ENST00000530818 HNRNPUL2Q1KMD3 747 aaKnown RBP8.73□□□□□ -1.01
PTPN11-203ENST00000530818 CACNB1Q02641 598 aaPredicted RBP8.64□□□□□ -1.03
PTPN11-203ENST00000530818 CAPN15O75808 1086 aa8.6□□□□□ -1.03
PTPN11-203ENST00000530818 TRHP20396 242 aaPredicted RBP8.6□□□□□ -1.03
PTPN11-203ENST00000530818 ZNF219Q9P2Y4 722 aaPredicted RBP8.58□□□□□ -1.04
PTPN11-203ENST00000530818 APLP2Q06481 763 aa8.57□□□□□ -1.04
PTPN11-203ENST00000530818 DSG3P32926 999 aa8.53□□□□□ -1.04
PTPN11-203ENST00000530818 ABCB7O75027 752 aa8.5□□□□□ -1.05
PTPN11-203ENST00000530818 POLA2Q14181 598 aa8.5□□□□□ -1.05
PTPN11-203ENST00000530818 MKRN4PQ13434 485 aaPredicted RBP8.42□□□□□ -1.06
PTPN11-203ENST00000530818 FBLN2P98095 1184 aa8.24□□□□□ -1.09
PTPN11-203ENST00000530818 ZBTB12Q9Y330 459 aaPredicted RBP8.22□□□□□ -1.09
PTPN11-203ENST00000530818 FKBP8Q14318 412 aa8.21□□□□□ -1.1
PTPN11-203ENST00000530818 OSCARQ8IYS5 282 aa8.2□□□□□ -1.1
PTPN11-203ENST00000530818 SPDYE4A6NLX3 237 aa8.15□□□□□ -1.1
PTPN11-203ENST00000530818 PROM2Q8N271 834 aa8.09□□□□□ -1.11
PTPN11-203ENST00000530818 SSUH2Q9Y2M2 353 aa8.09□□□□□ -1.11
PTPN11-203ENST00000530818 SPDYE2BA6NHP3 402 aa8.08□□□□□ -1.12
PTPN11-203ENST00000530818 SPDYE6P0CI01 402 aa8.08□□□□□ -1.12
PTPN11-203ENST00000530818 SPDYE2Q495Y8 402 aa8.08□□□□□ -1.12
PTPN11-203ENST00000530818 ZNF692Q9BU19 519 aaPredicted RBP8.08□□□□□ -1.12
PTPN11-203ENST00000530818 PABPN1Q86U42 306 aaKnown RBP eCLIP7.99□□□□□ -1.13
PTPN11-203ENST00000530818 RBM42Q9BTD8 480 aaKnown RBP7.98□□□□□ -1.13
PTPN11-203ENST00000530818 AKT1S1Q96B36 256 aa7.97□□□□□ -1.13
PTPN11-203ENST00000530818 REM2Q8IYK8 340 aaPredicted RBP7.94□□□□□ -1.14
PTPN11-203ENST00000530818 PITPNM1O00562 1244 aa7.84□□□□□ -1.15
PTPN11-203ENST00000530818 SPDYE1Q8NFV5 336 aaPredicted RBP7.81□□□□□ -1.16
PTPN11-203ENST00000530818 FBXO3Q9UK99 471 aa7.81□□□□□ -1.16
PTPN11-203ENST00000530818 POTEHQ6S545 545 aa7.8□□□□□ -1.16
PTPN11-203ENST00000530818 CLEC11AQ9Y240 323 aa7.8□□□□□ -1.16
PTPN11-203ENST00000530818 STAG3Q9UJ98 1225 aa7.79□□□□□ -1.16
PTPN11-203ENST00000530818 VASPP50552 380 aaPredicted RBP7.77□□□□□ -1.17
PTPN11-203ENST00000530818 IFNLR1Q8IU57 520 aaPredicted RBP7.76□□□□□ -1.17
PTPN11-203ENST00000530818 PRR29P0C7W0 189 aa7.74□□□□□ -1.17
PTPN11-203ENST00000530818 CREBZFQ9NS37 354 aa7.74□□□□□ -1.17
PTPN11-203ENST00000530818 CHRDL2Q6WN34 429 aa7.72□□□□□ -1.17
PTPN11-203ENST00000530818 FXR2P51116 673 aaKnown RBP eCLIP7.71□□□□□ -1.181e-9■■■■■ 36
PTPN11-203ENST00000530818 MNX1P50219 401 aaPredicted RBP7.7□□□□□ -1.18
PTPN11-203ENST00000530818 MIER1Q8N108 512 aa7.7□□□□□ -1.18
PTPN11-203ENST00000530818 CHADLQ6NUI6 762 aa7.69□□□□□ -1.18
PTPN11-203ENST00000530818 PIP4P2Q8N4L2 257 aa7.67□□□□□ -1.18
PTPN11-203ENST00000530818 PLCD3Q8N3E9 789 aa7.66□□□□□ -1.18
PTPN11-203ENST00000530818 PRKAR2AP13861 404 aaKnown RBP7.62□□□□□ -1.19
PTPN11-203ENST00000530818 KLHL34Q8N239 644 aa7.59□□□□□ -1.19
PTPN11-203ENST00000530818 RTN4Q9NQC3 1192 aaKnown RBP7.59□□□□□ -1.19
PTPN11-203ENST00000530818 NUBP1P53384 320 aa7.58□□□□□ -1.2
PTPN11-203ENST00000530818 FARP1Q9Y4F1 1045 aaPredicted RBP7.58□□□□□ -1.2
PTPN11-203ENST00000530818 SPOCK2Q92563 424 aa7.56□□□□□ -1.2
PTPN11-203ENST00000530818 PLEKHG5O94827 1062 aa7.53□□□□□ -1.2
PTPN11-203ENST00000530818 RASEFQ8IZ41 740 aa7.53□□□□□ -1.2
PTPN11-203ENST00000530818 PKD2Q13563 968 aa7.52□□□□□ -1.21
PTPN11-203ENST00000530818 ZBTB47Q9UFB7 747 aaPredicted RBP7.51□□□□□ -1.21
PTPN11-203ENST00000530818 AMER1Q5JTC6 1135 aaPredicted RBP7.49□□□□□ -1.21
PTPN11-203ENST00000530818 NPM1P06748 294 aaKnown RBP eCLIP7.47□□□□□ -1.21
PTPN11-203ENST00000530818 EVX2Q03828 476 aa7.46□□□□□ -1.22
PTPN11-203ENST00000530818 C19orf67A6NJJ6 358 aa7.44□□□□□ -1.22
PTPN11-203ENST00000530818 DCAF8Q5TAQ9 597 aa7.44□□□□□ -1.22
PTPN11-203ENST00000530818 TSPYL2Q9H2G4 693 aaPredicted RBP7.43□□□□□ -1.22
PTPN11-203ENST00000530818 CIZ1Q9ULV3 898 aaPredicted RBP7.43□□□□□ -1.22
PTPN11-203ENST00000530818 CCDC61Q9Y6R9 512 aa7.41□□□□□ -1.22
PTPN11-203ENST00000530818 CD44P16070 742 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms