RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 SIP14410 1827 aa4.41□□□□□ -1.7
NSMCE2-211ENST00000523549 MYO7AQ13402 2215 aa4.4□□□□□ -1.7
NSMCE2-211ENST00000523549 AQP7P3A6NL99 342 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 A6NNZ2 444 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 LACTBL1A8MY62 500 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 RAB27BO00194 218 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 RNMTO43148 476 aaKnown RBP4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 CTIFO43310 598 aaKnown RBP4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 PRPF3O43395 683 aaKnown RBP4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 UFL1O94874 794 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 NDUFB8O95169 186 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 CA3P07451 260 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 NGFRP08138 427 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 TXNP10599 105 aaKnown RBP4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 FMO1Q01740 532 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 MINDY4Q4G0A6 757 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 ZNF628Q5EBL2 1059 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 FAM102BQ5T8I3 360 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 ZNF793Q6ZN11 406 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 ERO1BQ86YB8 467 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 RAVER1Q8IY67 606 aaKnown RBP4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 ANKRD13CQ8N6S4 541 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 C11orf44Q8N8P7 122 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 TMEM105Q8N8V8 129 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 ASB5Q8WWX0 329 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 FAM84BQ96KN1 310 aaPredicted RBP4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 FCRL5Q96RD9 977 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 TMEM204Q9BSN7 226 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 TEX13AQ9BXU3 409 aaPredicted RBP4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 CHST8Q9H2A9 424 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 USP29Q9HBJ7 922 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 STEAP1Q9UHE8 339 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 MID2Q9UJV3 735 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 SH3TC1Q8TE82 1336 aa4.4□□□□□ -1.71
NSMCE2-211ENST00000523549 COL11A1P12107 1806 aaPredicted RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 CREBBPQ92793 2442 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 TRBV5-3A0A0A0MS03 114 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 SRRM3A6NNA2 597 aaPredicted RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 PQBP1O60828 265 aaKnown RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 ATG13O75143 517 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 TGFB3P10600 412 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 SLC5A1P13866 664 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 HOXB2P14652 356 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 CSF2RAP15509 400 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 ZKSCAN1P17029 563 aaPredicted RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 TNFRSF8P28908 595 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 ARRB2P32121 409 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 ALDH7A1P49419 539 aaKnown RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 PGGT1BP53609 377 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 CACNB3P54284 484 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 STK3Q13188 491 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 INPP5JQ15735 1006 aaPredicted RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 CCL14Q16627 93 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 FAM71DQ8N9W8 422 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 ZBTB8BQ8NAP8 495 aaPredicted RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 SLC44A5Q8NCS7 719 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 SMCR8Q8TEV9 937 aaPredicted RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 GDPD5Q8WTR4 605 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 CELF1Q92879 486 aaKnown RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 LRRC27Q9C0I9 530 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 VPS45Q9NRW7 570 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 DECR2Q9NUI1 292 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 SELENONQ9NZV5 590 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 MSRB1Q9NZV6 116 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 VPS51Q9UID3 782 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 NOB1Q9ULX3 412 aaKnown RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 USP16Q9Y5T5 823 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 SIRT4Q9Y6E7 314 aaPredicted RBP4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 SMCHD1A6NHR9 2005 aa4.39□□□□□ -1.71
NSMCE2-211ENST00000523549 SCN5AQ14524 2016 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 SETD2Q9BYW2 2564 aaPredicted RBP4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 A0A0G2JK05 382 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 SLC22A23A1A5C7 686 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 SPTLC2O15270 562 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 MYF5P13349 255 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 TPH1P17752 444 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 BTF3P20290 206 aaKnown RBP4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 RPS6KB1P23443 525 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 NTSR1P30989 418 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 COPAP53621 1224 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 SIGLEC14Q08ET2 396 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 PPIGQ13427 754 aaKnown RBP eCLIP4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 DNASE1L3Q13609 305 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 CLCA4Q14CN2 919 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 DLGAP5Q15398 846 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 PRTGQ2VWP7 1150 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 ODR4Q5SWX8 454 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 RNF220Q5VTB9 566 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 PLAG1Q6DJT9 500 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 NXNQ6DKJ4 435 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 GRHL2Q6ISB3 625 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 MZT2AQ6P582 158 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 RFX8Q6ZV50 586 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 SESTD1Q86VW0 696 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 YAF2Q8IY57 180 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 NEK9Q8TD19 979 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 LRTOMTQ8WZ04 291 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 LPAR1Q92633 364 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 APIPQ96GX9 242 aa4.38□□□□□ -1.71
NSMCE2-211ENST00000523549 PRR11Q96HE9 360 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms