RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 GANQ9H2C0 597 aa20.19■□□□□ 0.82
CERNA3-201ENST00000521403 NOCTQ9UK39 431 aaKnown RBP20.19■□□□□ 0.82
CERNA3-201ENST00000521403 GPSM3Q9Y4H4 160 aa20.19■□□□□ 0.82
CERNA3-201ENST00000521403 PCDHGA1Q9Y5H4 931 aa20.19■□□□□ 0.82
CERNA3-201ENST00000521403 DOCK4Q8N1I0 1966 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 RNF103O00237 685 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 PCDH8O95206 1070 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 DNA2P51530 1060 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 CLDN6P56747 220 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 CDR2Q01850 454 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 GNA12Q03113 381 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 KRT31Q15323 416 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 FKBP15Q5T1M5 1219 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 DPY19L3Q6ZPD9 716 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 ERN2Q76MJ5 926 aaKnown RBP20.18■□□□□ 0.82
CERNA3-201ENST00000521403 ARCQ7LC44 396 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 TMPRSS12Q86WS5 348 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 HORMAD1Q86X24 394 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 SLC30A5Q8TAD4 765 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 PPP1R16AQ96I34 528 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 C11orf70Q9BRQ4 267 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 FZD3Q9NPG1 666 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 NLRC4Q9NPP4 1024 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 KNTC1P50748 2209 aa20.18■□□□□ 0.82
CERNA3-201ENST00000521403 LEFTY1O75610 366 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 JUPP14923 745 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 MMP8P22894 467 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 SDC4P31431 198 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 HNF1BP35680 557 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 SOX5P35711 763 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 ACADVLP49748 655 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 SERPINH1P50454 418 aaKnown RBP20.17■□□□□ 0.82
CERNA3-201ENST00000521403 FMO1Q01740 532 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 CAMK2BQ13554 666 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 C15orf59Q2T9L4 293 aaPredicted RBP20.17■□□□□ 0.82
CERNA3-201ENST00000521403 RAB6CQ53S08 254 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 ARTNQ5T4W7 220 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 SFMBT2Q5VUG0 894 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 RWDD4Q6NW29 188 aaKnown RBP20.17■□□□□ 0.82
CERNA3-201ENST00000521403 NEK5Q6P3R8 708 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 PDCD7Q8N8D1 485 aaKnown RBP20.17■□□□□ 0.82
CERNA3-201ENST00000521403 TMEM145Q8NBT3 493 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 RXFP2Q8WXD0 754 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 RAB6CQ9H0N0 254 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 ZNF212Q9UDV6 495 aa20.17■□□□□ 0.82
CERNA3-201ENST00000521403 EPHB6O15197 1021 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 CYP1A1P04798 512 aaPredicted RBP20.16■□□□□ 0.82
CERNA3-201ENST00000521403 THEGLP0DJG4 465 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 CHRNB2P17787 502 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 AKT2P31751 481 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 ARF5P84085 180 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 ZNF284Q2VY69 593 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 ARL13BQ3SXY8 428 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 CDKAL1Q5VV42 579 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 SEL1L3Q68CR1 1132 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 HNRNPLLQ8WVV9 542 aaKnown RBP20.16■□□□□ 0.82
CERNA3-201ENST00000521403 PCMTD1Q96MG8 357 aaPredicted RBP20.16■□□□□ 0.82
CERNA3-201ENST00000521403 HDAC8Q9BY41 377 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 CEP44Q9C0F1 390 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 LMBRD1Q9NUN5 540 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 PPARGC1AQ9UBK2 798 aaKnown RBP20.16■□□□□ 0.82
CERNA3-201ENST00000521403 DKK4Q9UBT3 224 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 OR12D3Q9UGF7 316 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 FCF1Q9Y324 198 aaKnown RBP20.16■□□□□ 0.82
CERNA3-201ENST00000521403 ACTL7AQ9Y615 435 aa20.16■□□□□ 0.82
CERNA3-201ENST00000521403 ZNF821O75541 412 aaPredicted RBP20.15■□□□□ 0.82
CERNA3-201ENST00000521403 ZMPSTE24O75844 475 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 GJB6O95452 261 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 C1SP09871 688 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 CDK4P11802 303 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 HNRNPA2B1P22626 353 aaKnown RBP20.15■□□□□ 0.82
CERNA3-201ENST00000521403 NEK3P51956 506 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 JAM2P57087 298 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 SLC20A2Q08357 652 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 COL28A1Q2UY09 1125 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 CCDC14Q49A88 953 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 KANSL1Q7Z3B3 1105 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 PCDH20Q8N6Y1 951 aaKnown RBP20.15■□□□□ 0.82
CERNA3-201ENST00000521403 JOSD2Q8TAC2 188 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 GPT2Q8TD30 523 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 TSC1Q92574 1164 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 HEPHQ9BQS7 1158 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 CALN1Q9BXU9 219 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 TM6SF2Q9BZW4 377 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 FANCLQ9NW38 375 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 ZFR2Q9UPR6 939 aaKnown RBP20.15■□□□□ 0.82
CERNA3-201ENST00000521403 WASF2Q9Y6W5 498 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 ADAMTS20P59510 1910 aa20.15■□□□□ 0.82
CERNA3-201ENST00000521403 ARID1BQ8NFD5 2236 aaPredicted RBP20.15■□□□□ 0.82
CERNA3-201ENST00000521403 URB1O60287 2271 aaKnown RBP20.15■□□□□ 0.82
CERNA3-201ENST00000521403 HOXB3P14651 431 aaPredicted RBP20.14■□□□□ 0.81
CERNA3-201ENST00000521403 CKMT2P17540 419 aa20.14■□□□□ 0.81
CERNA3-201ENST00000521403 ADRA1BP35368 520 aa20.14■□□□□ 0.81
CERNA3-201ENST00000521403 ACVRL1P37023 503 aa20.14■□□□□ 0.81
CERNA3-201ENST00000521403 STAT1P42224 750 aa20.14■□□□□ 0.81
CERNA3-201ENST00000521403 CCNHP51946 323 aaPredicted RBP20.14■□□□□ 0.81
CERNA3-201ENST00000521403 CLDN2P57739 230 aa20.14■□□□□ 0.81
CERNA3-201ENST00000521403 MAPK8IP2Q13387 824 aaPredicted RBP20.14■□□□□ 0.81
CERNA3-201ENST00000521403 CARD16Q5EG05 197 aa20.14■□□□□ 0.81
CERNA3-201ENST00000521403 HES3Q5TGS1 186 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms