RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 TAB2Q9NYJ8 693 aa15.51■□□□□ 0.07
CSMD1-207ENST00000520451 IL36AQ9UHA7 158 aa15.51■□□□□ 0.07
CSMD1-207ENST00000520451 TMEM59LQ9UK28 342 aa15.51■□□□□ 0.07
CSMD1-207ENST00000520451 ILVBLA1L0T0 632 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 RNF103O00237 685 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 PCDH8O95206 1070 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 THEGLP0DJG4 465 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 CKMT2P17540 419 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 EEF1GP26641 437 aaKnown RBP15.5■□□□□ 0.07
CSMD1-207ENST00000520451 AKT2P31751 481 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 COL9A2Q14055 689 aaPredicted RBP15.5■□□□□ 0.07
CSMD1-207ENST00000520451 ZNF284Q2VY69 593 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 ARSIQ5FYB1 569 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 ARTNQ5T4W7 220 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 HES3Q5TGS1 186 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 RETSATQ6NUM9 610 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 NEK5Q6P3R8 708 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 ZNF783Q6ZMS7 281 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 DPY19L3Q6ZPD9 716 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 ERN2Q76MJ5 926 aaKnown RBP15.5■□□□□ 0.07
CSMD1-207ENST00000520451 BNIPLQ7Z465 357 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 DRC7Q8IY82 874 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 NXPE2Q96DL1 559 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 PPP1R16AQ96I34 528 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 HDAC8Q9BY41 377 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 ATP13A1Q9HD20 1204 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 SCUBE2Q9NQ36 999 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 METTL5Q9NRN9 209 aaKnown RBP15.5■□□□□ 0.07
CSMD1-207ENST00000520451 ZNF212Q9UDV6 495 aa15.5■□□□□ 0.07
CSMD1-207ENST00000520451 LEFTY1O75610 366 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 GFPT2O94808 682 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 SERPINH1P50454 418 aaKnown RBP15.49■□□□□ 0.07
CSMD1-207ENST00000520451 DNA2P51530 1060 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 ATP11AP98196 1134 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 GNA12Q03113 381 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 SEL1L3Q68CR1 1132 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 ARCQ7LC44 396 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 EMC1Q8N766 993 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 SLC20A1Q8WUM9 679 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 CALN1Q9BXU9 219 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 CEP44Q9C0F1 390 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 GANQ9H2C0 597 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 NOCTQ9UK39 431 aaKnown RBP15.49■□□□□ 0.07
CSMD1-207ENST00000520451 ZFR2Q9UPR6 939 aaKnown RBP15.49■□□□□ 0.07
CSMD1-207ENST00000520451 WASF2Q9Y6W5 498 aa15.49■□□□□ 0.07
CSMD1-207ENST00000520451 URB1O60287 2271 aaKnown RBP15.48■□□□□ 0.07
CSMD1-207ENST00000520451 ZNF821O75541 412 aaPredicted RBP15.48■□□□□ 0.07
CSMD1-207ENST00000520451 ZMPSTE24O75844 475 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 HNRNPA2B1P22626 353 aaKnown RBP15.48■□□□□ 0.07
CSMD1-207ENST00000520451 NEK3P51956 506 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 CLDN2P57739 230 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 TARDBPQ13148 414 aaKnown RBP eCLIP15.48■□□□□ 0.07
CSMD1-207ENST00000520451 ILKQ13418 452 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 CDO1Q16878 200 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 PROX2Q3B8N5 592 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 RAB6CQ53S08 254 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 CT47A1Q5JQC4 288 aaPredicted RBP15.48■□□□□ 0.07
CSMD1-207ENST00000520451 FBXL19Q6PCT2 694 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 PHLDB2Q86SQ0 1253 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 ZNF677Q86XU0 584 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 PCDH20Q8N6Y1 951 aaKnown RBP15.48■□□□□ 0.07
CSMD1-207ENST00000520451 OR13H1Q8NG92 308 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 LRIG1Q96JA1 1093 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 RAB6CQ9H0N0 254 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 VPS16Q9H269 839 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 KLHL11Q9NVR0 708 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 PPARGC1AQ9UBK2 798 aaKnown RBP15.48■□□□□ 0.07
CSMD1-207ENST00000520451 FCF1Q9Y324 198 aaKnown RBP15.48■□□□□ 0.07
CSMD1-207ENST00000520451 DOCK9Q9BZ29 2069 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 KNTC1P50748 2209 aa15.48■□□□□ 0.07
CSMD1-207ENST00000520451 TRIM38O00635 465 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 SIGLEC6O43699 453 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 DGKAP23743 735 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 ITGB7P26010 798 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 SDC4P31431 198 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 KLK7P49862 253 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 CCNHP51946 323 aaPredicted RBP15.47■□□□□ 0.07
CSMD1-207ENST00000520451 POLR2FP61218 127 aaKnown RBP15.47■□□□□ 0.07
CSMD1-207ENST00000520451 ARF5P84085 180 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 CDR2Q01850 454 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 SLC20A2Q08357 652 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
CSMD1-207ENST00000520451 ZNF211Q13398 564 aaPredicted RBP15.47■□□□□ 0.07
CSMD1-207ENST00000520451 C15orf59Q2T9L4 293 aaPredicted RBP15.47■□□□□ 0.07
CSMD1-207ENST00000520451 ARL13BQ3SXY8 428 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 TMEM259Q4ZIN3 620 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 HS1BP3Q53T59 392 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 CARD16Q5EG05 197 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 RWDD4Q6NW29 188 aaKnown RBP15.47■□□□□ 0.07
CSMD1-207ENST00000520451 GCNT7Q6ZNI0 430 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 PTAR1Q7Z6K3 402 aaPredicted RBP15.47■□□□□ 0.07
CSMD1-207ENST00000520451 SLC25A45Q8N413 288 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 SLC30A5Q8TAD4 765 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 RXFP2Q8WXD0 754 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 DCBLD2Q96PD2 775 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 HEPHQ9BQS7 1158 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 C11orf70Q9BRQ4 267 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 FAM207AQ9NSI2 230 aaPredicted RBP15.47■□□□□ 0.07
CSMD1-207ENST00000520451 UCKL1Q9NWZ5 548 aa15.47■□□□□ 0.07
CSMD1-207ENST00000520451 OR12D3Q9UGF7 316 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms