RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 MT-CO1P00395 513 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 AKT2P31751 481 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 NEK3P51956 506 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 UBXN1Q04323 297 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 SCAPQ12770 1279 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 SMAD1Q15797 465 aaKnown RBP14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 HS1BP3Q53T59 392 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 KCNT1Q5JUK3 1230 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 PIP5KL1Q5T9C9 394 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 KIAA1161Q6NSJ0 714 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 HORMAD1Q86X24 394 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 PROSER1Q86XN7 944 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 C3orf20Q8ND61 904 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 CASKIN2Q8WXE0 1202 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 CENPIQ92674 756 aaPredicted RBP14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 RAB7BQ96AH8 199 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 TBC1D31Q96DN5 1066 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 ARHGEF26Q96DR7 871 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 IFT43Q96FT9 208 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 HEPHQ9BQS7 1158 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 TMEM248Q9NWD8 314 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 ZNF212Q9UDV6 495 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 MYO6Q9UM54 1294 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 KNTC1P50748 2209 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 DOCK4Q8N1I0 1966 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 SIGLEC16A6NMB1 481 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 ENC1O14682 589 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 RIOK3O14730 519 aaKnown RBP14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 AP1G1O43747 822 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 ZMPSTE24O75844 475 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 FERP16591 822 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 CHRNB2P17787 502 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 GPD1P21695 349 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 HNRNPA2B1P22626 353 aaKnown RBP14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 RRM1P23921 792 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 ITGB7P26010 798 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 HNF1BP35680 557 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 POLD3Q15054 466 aaPredicted RBP14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 CCDC14Q49A88 953 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 C2CD6Q53TS8 623 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 CARD16Q5EG05 197 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 CCDC183Q5T5S1 534 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 MANEALQ5VSG8 457 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 TRNP1Q6NT89 227 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 EMC1Q8N766 993 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 TMEM145Q8NBT3 493 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 OR7D4Q8NG98 312 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 GPT2Q8TD30 523 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 SLC20A1Q8WUM9 679 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 FEM1CQ96JP0 617 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 CNDP2Q96KP4 475 aaKnown RBP14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 OSBPL1AQ9BXW6 950 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 EVA1BQ9NVM1 165 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 PLXNA2O75051 1894 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 TMEM131Q92545 1883 aa14.72□□□□□ -0.05
HMGCS1-203ENST00000507004 A0A1W2PQU0 124 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 SMAD6O43541 496 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 RAMP2O60895 175 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 RFPL3O75679 317 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 CTSLP07711 333 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 MAT2AP31153 395 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 L1CAMP32004 1257 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 HTR7P34969 479 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 TAS2R38P59533 333 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 SNRPD1P62314 119 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 RPS21P63220 83 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 RAD51Q06609 339 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 CDO1Q16878 200 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 CLEC16AQ2KHT3 1053 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 ARSIQ5FYB1 569 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 EFHC2Q5JST6 749 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 SFMBT2Q5VUG0 894 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 RWDD4Q6NW29 188 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 FBXL19Q6PCT2 694 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 DPY19L3Q6ZPD9 716 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 DRC7Q8IY82 874 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 CACTIN-AS1Q8N1I8 211 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 PDCD7Q8N8D1 485 aaKnown RBP14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 VCPIP1Q96JH7 1222 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 KLHL11Q9NVR0 708 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 SNX10Q9Y5X0 201 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 HS3ST3A1Q9Y663 406 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 IGF2RP11717 2491 aa14.71□□□□□ -0.05
HMGCS1-203ENST00000507004 FAM208BQ5VWN6 2430 aa14.71□□□□□ -0.06
HMGCS1-203ENST00000507004 SMTNL1A8MU46 457 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 EIF3CLB5ME19 914 aaKnown RBP14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 K7ERQ8 282 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 TSPAN6O43657 245 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 LEFTY1O75610 366 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 LRIG2O94898 1065 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 PCDH8O95206 1070 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 GSRP00390 522 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 PLEKP08567 350 aaPredicted RBP14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 NUMBP49757 651 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 KLK7P49862 253 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 CCNHP51946 323 aaPredicted RBP14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 ZNF143P52747 638 aaPredicted RBP14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 METAP1P53582 386 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 YBEYP58557 167 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms