RNA–Protein interactions for RNA: ENST00000506464.5

ABCC3-208, Transcript of ATP binding cassette subfamily C member 3, human

TSL 4

Gene ABCC3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCC3-208	ENST00000506464	OR12D3	Q9UGF7	316 aa		12.51	□□□□□ -0.41
ABCC3-208	ENST00000506464	CAPN11	Q9UMQ6	739 aa		12.51	□□□□□ -0.41
ABCC3-208	ENST00000506464	COL5A1	P20908	1838 aa	Predicted RBP	12.51	□□□□□ -0.41
ABCC3-208	ENST00000506464	TMEM131	Q92545	1883 aa		12.51	□□□□□ -0.41
ABCC3-208	ENST00000506464	TP53BP1	Q12888	1972 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	CEP295	Q9C0D2	2601 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464		A0A1W2PR77	199 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	SIGLEC16	A6NMB1	481 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	PRAMEF26	H0Y7S4	382 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464		H0Y8X5	98 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	CBFA2T2	O43439	604 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	TNFSF14	O43557	240 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	GPD1	P21695	349 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	SERPINH1	P50454	418 aa	Known RBP	12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	FAM193A	P78312	1265 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	ZBED6	P86452	979 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	KLHL30	Q0D2K2	578 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	SCAP	Q12770	1279 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	CCDC14	Q49A88	953 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	MANEAL	Q5VSG8	457 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	AGBL4	Q5VU57	503 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	HGSNAT	Q68CP4	663 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	C22orf39	Q6P5X5	142 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	TFAP2D	Q7Z6R9	452 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	GALNT15	Q8N3T1	639 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	EMC1	Q8N766	993 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	OR2A12	Q8NGT7	310 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	ISG20	Q96AZ6	181 aa	Known RBP	12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	TBC1D31	Q96DN5	1066 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	LRIG1	Q96JA1	1093 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	VCPIP1	Q96JH7	1222 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	HDAC8	Q9BY41	377 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	MAGEH1	Q9H213	219 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	ATP13A1	Q9HD20	1204 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	TMEM248	Q9NWD8	314 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	TAS2R14	Q9NYV8	317 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	IL36A	Q9UHA7	158 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	SARDH	Q9UL12	918 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	HPCAL4	Q9UM19	191 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	SLCO1B1	Q9Y6L6	691 aa		12.5	□□□□□ -0.41
ABCC3-208	ENST00000506464	MAP1B	P46821	2468 aa	Known RBP	12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464		A0A0D9SEW6	157 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	TCRBV5S1A1T	A0A578	114 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	TLR4	O00206	839 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	CBX4	O00257	560 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	DDX3X	O00571	662 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	SNAP91	O60641	907 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	DKK1	O94907	266 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	GJB6	O95452	261 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	TNFAIP3	P21580	790 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	HTR7	P34969	479 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	RXRG	P48443	463 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	NXPH1	P58417	271 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	CNTN1	Q12860	1018 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	STAT4	Q14765	748 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	CDO1	Q16878	200 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	SPECC1L	Q69YQ0	1117 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	ACAD10	Q6JQN1	1059 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	DNAJC24	Q6P3W2	148 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	SARM1	Q6SZW1	724 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	PHLDB2	Q86SQ0	1253 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	GAS2L3	Q86XJ1	694 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	VSTM4	Q8IW00	320 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	JOSD2	Q8TAC2	188 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	FAM172A	Q8WUF8	416 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	CPLX3	Q8WVH0	158 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	CASKIN2	Q8WXE0	1202 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	SYN2	Q92777	582 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	SPON2	Q9BUD6	331 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	RBSN	Q9H1K0	784 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	EBF2	Q9HAK2	575 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	ARHGAP20	Q9P2F6	1191 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	CACNA1B	Q00975	2339 aa		12.49	□□□□□ -0.41
ABCC3-208	ENST00000506464	C1QTNF9B	B2RNN3	333 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	EIF3CL	B5ME19	914 aa	Known RBP	12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	KPNA3	O00505	521 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	BNIP3L	O60238	219 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	RTN2	O75298	545 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	ZMPSTE24	O75844	475 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	MT-CO1	P00395	513 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	PLEK	P08567	350 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	C1S	P09871	688 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	C1QTNF9	P0C862	333 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	SKIL	P12757	684 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	SPINK2	P20155	84 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	RRM1	P23921	792 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	CASP14	P31944	242 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	L1CAM	P32004	1257 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	RFC1	P35251	1148 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	ZNF143	P52747	638 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	HDAC4	P56524	1084 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	PPP2CB	P62714	309 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	PPP2CA	P67775	309 aa		12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	POLD3	Q15054	466 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCC3-208	ENST00000506464	CARD16	Q5EG05	197 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms