RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 AGAP1Q9UPQ3 857 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 ZNF451Q9Y4E5 1061 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 PCDHGB7Q9Y5F8 929 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 PCDHGA6Q9Y5G7 932 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 PCDHGA10Q9Y5H3 936 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SNX9Q9Y5X1 595 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 HS3ST3A1Q9Y663 406 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 RPS6KL1Q9Y6S9 549 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 USF3Q68DE3 2245 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 ABCA1O95477 2261 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 A0A0G2JK05 382 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 EDDM13A0A1B0GTR0 161 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 A0A1W2PQH9 124 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 HHLA1C9JL84 531 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 CREG1O75629 220 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 CPNE6O95741 557 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 IL1BP01584 269 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 ATP5BP06576 529 aaKnown RBP3.44□□□□□ -1.86
TCOF1-208ENST00000506063 NEFLP07196 543 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 GLB1P16278 677 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 ZNF28P17035 718 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 IFNAR1P17181 557 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 BMP6P22004 513 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 CD1CP29017 333 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 DLSTP36957 453 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 TXKP42681 527 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 RABIFP47224 123 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 CSNK1G2P78368 415 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 KRT83P78385 493 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 ADORA2A-AS1P86434 159 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 GOLGA8FQ08AF8 430 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 GOLGA8DPQ0D2H9 430 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 AAMPQ13685 434 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 GNL2Q13823 731 aaKnown RBP3.44□□□□□ -1.86
TCOF1-208ENST00000506063 PDE1CQ14123 709 aaPredicted RBP3.44□□□□□ -1.86
TCOF1-208ENST00000506063 HLTFQ14527 1009 aaKnown RBP eCLIP3.44□□□□□ -1.86
TCOF1-208ENST00000506063 ELAVL3Q14576 367 aaKnown RBP3.44□□□□□ -1.86
TCOF1-208ENST00000506063 NR1D2Q14995 579 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 NECTIN1Q15223 517 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 CEBPEQ15744 281 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 DCAF12Q5T6F0 453 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 NEK5Q6P3R8 708 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 LVRNQ6Q4G3 990 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 DPH6Q7L8W6 267 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 DYMQ7RTS9 669 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 RD3Q7Z3Z2 195 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 CUZD1Q86UP6 607 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 DENND1CQ8IV53 801 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 CEP97Q8IW35 865 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 AGBL5Q8NDL9 886 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 ZSWIM2Q8NEG5 633 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 OR6C4Q8NGE1 309 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 FUBP1Q96AE4 644 aaKnown RBP3.44□□□□□ -1.86
TCOF1-208ENST00000506063 MYEOVQ96EZ4 313 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 FEM1CQ96JP0 617 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 RUFY1Q96T51 708 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 SMOQ99835 787 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 CTRCQ99895 268 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 SLX1AQ9BQ83 275 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 MRPL45Q9BRJ2 306 aaKnown RBP3.44□□□□□ -1.86
TCOF1-208ENST00000506063 MSTO1Q9BUK6 570 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 SLC26A6Q9BXS9 759 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 ASPSCR1Q9BZE9 553 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 LNPKQ9C0E8 428 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 NACA2Q9H009 215 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 LSG1Q9H089 658 aaKnown RBP3.44□□□□□ -1.86
TCOF1-208ENST00000506063 ING2Q9H160 280 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 IKZF4Q9H2S9 585 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 C17orf75Q9HAS0 396 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 TLR8Q9NR97 1041 aaKnown RBP3.44□□□□□ -1.86
TCOF1-208ENST00000506063 FGF21Q9NSA1 209 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 COMMD8Q9NX08 183 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 TMEM9Q9P0T7 183 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 PDP2Q9P2J9 529 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 USP25Q9UHP3 1055 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 STOML2Q9UJZ1 356 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 KCNJ14Q9UNX9 436 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 ERVW-1Q9UQF0 538 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 SCML2Q9UQR0 700 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 B3GNT3Q9Y2A9 372 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 ZNF510Q9Y2H8 683 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 COPG1Q9Y678 874 aaKnown RBP3.44□□□□□ -1.86
TCOF1-208ENST00000506063 STYXL1Q9Y6J8 313 aa3.44□□□□□ -1.86
TCOF1-208ENST00000506063 MPDZO75970 2070 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 A0A0U1RQS6 177 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CCDC196A0A1B0GTZ2 297 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 A6NCN8 305 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 SERINC4A6NH21 518 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 ANKRD63C9JTQ0 380 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CD2BP2O95400 341 aaKnown RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 BAG4O95429 457 aaKnown RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CYBBP04839 570 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CTSLP07711 333 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 HMBSP08397 361 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 PLS3P13797 630 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 EDN3P14138 238 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 GSPT1P15170 499 aaKnown RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 POLR2EP19388 210 aaKnown RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 ADSLP30566 484 aaPredicted RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 HOXC12P31275 282 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms