RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CHORDC1Q9UHD1 332 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 USP15Q9Y4E8 981 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 A0A075B6Q4 140 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SH3PXD2BA1X283 911 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TREHO43280 583 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CPA2P48052 419 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SLC26A5P58743 744 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 ACTR1AP61163 376 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 MERTKQ12866 999 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 PIN1Q13526 163 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 DLGAP5Q15398 846 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 KYAT1Q16773 422 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 NDUFAF5Q5TEU4 345 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 FAM205BPQ63HN1 556 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TYW3Q6IPR3 259 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 S100A7AQ86SG5 101 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 MPP5Q8N3R9 675 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SYNPOQ8N3V7 929 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 POC5Q8NA72 575 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 THAP3Q8WTV1 239 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 GAL3ST4Q96RP7 486 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 VAT1Q99536 393 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 C1QTNF1Q9BXJ1 281 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SEMA4AQ9H3S1 761 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 COPS7BQ9H9Q2 264 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 IFT46Q9NQC8 304 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 NSMCE4AQ9NXX6 385 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 UXTQ9UBK9 157 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 KLHL3Q9UH77 587 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 MAP3K19Q56UN5 1328 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CPNE3O75131 537 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 PRKD3O94806 890 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 ATF2P15336 505 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 PTPN1P18031 435 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TLX1P31314 330 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CSTF2P33240 577 aaKnown RBP eCLIP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SESN2P58004 480 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 BTN3A2P78410 334 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 HSPA14Q0VDF9 509 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TRIP10Q15642 601 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SLC9C1Q4G0N8 1177 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 XKR3Q5GH77 459 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 C4orf33Q8N1A6 199 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 IL17RDQ8NFM7 739 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 XPO6Q96QU8 1125 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 MKNK2Q9HBH9 465 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 COPZ2Q9P299 210 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SARDHQ9UL12 918 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 GPSM3Q9Y4H4 160 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SYCP2Q9BX26 1530 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SERTM1A2A2V5 107 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 A6NLC8 198 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 F8W036 122 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SMAD6O43541 496 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 DENRO43583 198 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 AP2A2O94973 939 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TGM6O95932 706 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SLC2A1P11166 492 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CDH1P12830 882 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SLC26A3P40879 764 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SLC5A3P53794 718 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 HERVK_113P63132 956 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TRIM61Q5EBN2 209 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 C6orf132Q5T0Z8 1188 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 STEAP3Q658P3 488 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 FAM92BQ6ZTR7 304 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SATL1Q86VE3 508 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CARFQ8N187 725 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 NIPA2Q8N8Q9 360 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 DMRTB1Q96MA1 342 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF230Q9UIE0 474 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 RAB23Q9ULC3 237 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 ARHGEF10O15013 1369 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 KDM5AP29375 1690 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 NLRP1Q9C000 1473 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 H0Y858 1186 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 WASLO00401 505 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 WFS1O76024 890 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 KCNK5O95279 499 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 FAM58BPP0C7Q3 252 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 BCAR1P56945 870 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 RAB5BP61020 215 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SCGB2A2Q13296 93 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 PTPAQ15257 358 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 KIZQ2M2Z5 673 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 KLHL22Q53GT1 634 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF544Q6NX49 715 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 PSRC1Q6PGN9 363 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 ABRAXAS1Q6UWZ7 409 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 AMIGO1Q86WK6 493 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 PSTKQ8IV42 348 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 LSMEM2Q8N112 164 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 ZFP82Q8N141 532 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CLIP4Q8N3C7 705 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 BLOC1S5Q8TDH9 187 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TCTEX1D2Q8WW35 142 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 HDAC10Q969S8 669 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 MTBPQ96DY7 904 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 VRK1Q99986 396 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SLX1AQ9BQ83 275 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms