RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 TEX13BQ9BXU2 312 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 SLC6A17Q9H1V8 727 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 OSGEPL1Q9H4B0 414 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 SOX17Q9H6I2 414 aaPredicted RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 MRM3Q9HC36 420 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 CHST7Q9NS84 486 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 IARS2Q9NSE4 1012 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 RIMS3Q9UJD0 308 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.1□□□□□ -1.75
ATG3-207ENST00000494571 PCDHGA2Q9Y5H1 932 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 PCDHA3Q9Y5H8 950 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CSADQ9Y600 493 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 ALG6Q9Y672 507 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CACNG2Q9Y698 323 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 V9GY48 417 aaPredicted RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 CD163L1Q9NR16 1453 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 ABCA3Q99758 1704 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 C10orf71Q711Q0 1435 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 ARHGEF10O15013 1369 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 SYNGAP1Q96PV0 1343 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 TEX51A0A1B0GUA7 166 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 OR5K3A6NET4 321 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 TTLL8A6PVC2 850 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 LEUTXA8MZ59 168 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 E5RI56 91 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 PI4K2BG5E9Z4 385 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 STX16-NPEPL1H3BU86 382 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 WWP2O00308 870 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CTDSP2O14595 271 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 ZBTB5O15062 677 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 SSX4O60224 188 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 TPST1O60507 370 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 PLA2G6O60733 806 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 TOM1L1O75674 476 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 MT-ND3P03897 115 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 RBP1P09455 135 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 RNF224P0DH78 156 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 ENO3P13929 434 aaPredicted RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 MSH3P20585 1137 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 IL12AP29459 219 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CHRNA5P30532 468 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 HOXC13P31276 330 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 GPC1P35052 558 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 ZNF76P36508 570 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CCT3P49368 545 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 SRP54P61011 504 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 BST1Q10588 318 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 DRAP1Q14919 205 aaPredicted RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 PTPRRQ15256 657 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CHI3L2Q15782 390 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 NFIL3Q16649 462 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CYP27C1Q4G0S4 372 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CRTC3Q6UUV7 619 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 KIAA1324Q6UXG2 1013 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 ARHGAP36Q6ZRI8 547 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 ZBTB49Q6ZSB9 765 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 FRMD7Q6ZUT3 714 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 ZNF467Q7Z7K2 595 aaPredicted RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 SLFN11Q7Z7L1 901 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CRLF3Q8IUI8 442 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 LNX2Q8N448 690 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 KIAA0895Q8NCT3 520 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 AGBL3Q8NEM8 1001 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 ZNF420Q8TAQ5 688 aaPredicted RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 SYTL5Q8TDW5 730 aaPredicted RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 LPPQ93052 612 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 FBXL20Q96IG2 436 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 TEKT5Q96M29 485 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 FYTTD1Q96QD9 318 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 KCNK16Q96T55 309 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CDRT15Q96T59 188 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 MMP19Q99542 508 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 TSEN34Q9BSV6 310 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 COPS4Q9BT78 406 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 EFHD1Q9BUP0 239 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 SLC13A1Q9BZW2 595 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 PUS7LQ9H0K6 701 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 THAP2Q9H0W7 228 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 SLA2Q9H6Q3 261 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 RANBP3Q9H6Z4 567 aaPredicted RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 NOL11Q9H8H0 719 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 ENTPD7Q9NQZ7 604 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 SDHAF3Q9NRP4 125 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 BLOC1S4Q9NUP1 217 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 ASNSD1Q9NWL6 643 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 PKD2L1Q9P0L9 805 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 AFF4Q9UHB7 1163 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 PCYOX1Q9UHG3 505 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 TSR3Q9UJK0 312 aaKnown RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 PSME2Q9UL46 239 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 DAGLAQ9Y4D2 1042 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 SNCAIPQ9Y6H5 919 aa4.1□□□□□ -1.75
ATG3-207ENST00000494571 CICQ96RK0 1608 aaPredicted RBP4.1□□□□□ -1.75
ATG3-207ENST00000494571 CPDO75976 1380 aa4.09□□□□□ -1.75
ATG3-207ENST00000494571 ZNF701M0R085 212 aaPredicted RBP4.09□□□□□ -1.75
ATG3-207ENST00000494571 GRM8O00222 908 aa4.09□□□□□ -1.75
ATG3-207ENST00000494571 CYB561D2O14569 222 aa4.09□□□□□ -1.75
ATG3-207ENST00000494571 ARHGEF9O43307 516 aa4.09□□□□□ -1.75
ATG3-207ENST00000494571 PSTPIP1O43586 416 aa4.09□□□□□ -1.75
ATG3-207ENST00000494571 DCXO43602 365 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms