RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 GAREM1Q9H706 876 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 STARD7Q9NQZ5 370 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 SLC52A1Q9NWF4 448 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 SLC25A13Q9UJS0 675 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 NFU1Q9UMS0 254 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 MMP24Q9Y5R2 645 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 ABCC2Q92887 1545 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 UHRF1BP1LA0JNW5 1464 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 PLB1Q6P1J6 1458 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 PRXQ9BXM0 1461 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 DISP1Q96F81 1524 aa4.23□□□□□ -1.73
PHC3-213ENST00000491258 HSPB6O14558 160 aa4.23□□□□□ -1.73
PHC3-213ENST00000491258 CLGNO14967 610 aa4.23□□□□□ -1.73
PHC3-213ENST00000491258 ARL16Q0P5N6 197 aa4.23□□□□□ -1.73
PHC3-213ENST00000491258 ARL6IP4Q66PJ3 421 aaKnown RBP4.23□□□□□ -1.73
PHC3-213ENST00000491258 ABHD16BQ9H3Z7 469 aa4.23□□□□□ -1.73
PHC3-213ENST00000491258 Q9N2J8 555 aa4.23□□□□□ -1.73
PHC3-213ENST00000491258 BIVM-ERCC5R4GMW8 1640 aa4.23□□□□□ -1.73
PHC3-213ENST00000491258 CHD1O14646 1710 aa4.23□□□□□ -1.73
PHC3-213ENST00000491258 MAPKBP1O60336 1514 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 SHROOM2Q13796 1616 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 IGLV5-37A0A075B6J1 123 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 PRAC2D3DTV9 90 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 EYA2O00167 538 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 XPNPEP2O43895 674 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 CLDN7O95471 211 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 PAK4O96013 591 aaPredicted RBP4.22□□□□□ -1.73
PHC3-213ENST00000491258 ENO3P13929 434 aaPredicted RBP4.22□□□□□ -1.73
PHC3-213ENST00000491258 HOXB9P17482 250 aaPredicted RBP4.22□□□□□ -1.73
PHC3-213ENST00000491258 ATF3P18847 181 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 GLIPR1P48060 266 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 CRIP2P52943 208 aaPredicted RBP4.22□□□□□ -1.73
PHC3-213ENST00000491258 OAZ1P54368 228 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 MYBPHQ13203 477 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 IFIT5Q13325 482 aaKnown RBP4.22□□□□□ -1.73
PHC3-213ENST00000491258 MYBPC2Q14324 1141 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 SMIM29Q86T20 159 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 ENDOVQ8N8Q3 282 aaKnown RBP4.22□□□□□ -1.73
PHC3-213ENST00000491258 TMEM163Q8TC26 289 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 NEK9Q8TD19 979 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 TSR2Q969E8 191 aaKnown RBP4.22□□□□□ -1.73
PHC3-213ENST00000491258 UHRF2Q96PU4 802 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 NECTIN3Q9NQS3 549 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 DDX21Q9NR30 783 aaKnown RBP eCLIP4.22□□□□□ -1.73
PHC3-213ENST00000491258 FAM50BQ9Y247 325 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 CEP83Q9Y592 693 aa4.22□□□□□ -1.73
PHC3-213ENST00000491258 C17orf102A2RUQ5 167 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 AGAP5A6NIR3 686 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 KDM4EB2RXH2 506 aaPredicted RBP4.21□□□□□ -1.74
PHC3-213ENST00000491258 LDLRP01130 860 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 AFPP02771 609 aaKnown RBP4.21□□□□□ -1.74
PHC3-213ENST00000491258 PRKCHP24723 683 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 EEF1GP26641 437 aaKnown RBP4.21□□□□□ -1.74
PHC3-213ENST00000491258 RFC1P35251 1148 aaPredicted RBP4.21□□□□□ -1.74
PHC3-213ENST00000491258 PEX5P50542 639 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 ST3GAL1Q11201 340 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 SF3A3Q12874 501 aaKnown RBP eCLIP4.21□□□□□ -1.74
PHC3-213ENST00000491258 RAB30Q15771 203 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 TYW3Q6IPR3 259 aaKnown RBP4.21□□□□□ -1.74
PHC3-213ENST00000491258 C9orf139Q6ZV77 190 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 NAGSQ8N159 534 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 TAF15Q92804 592 aaKnown RBP eCLIP4.21□□□□□ -1.74
PHC3-213ENST00000491258 BICD1Q96G01 975 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 HDHD5Q9BXW7 423 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 PRDM2Q13029 1718 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 EPRSP07814 1512 aaKnown RBP4.21□□□□□ -1.74
PHC3-213ENST00000491258 KDM5BQ9UGL1 1544 aa4.21□□□□□ -1.74
PHC3-213ENST00000491258 SLC38A8A6NNN8 435 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 TULP2O00295 520 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 NCK2O43639 380 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 HLA-DQA2P01906 255 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 PRPH2P23942 346 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 TYK2P29597 1187 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 MXI1P50539 228 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 CLCNKBP51801 687 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 RCAN1P53805 252 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 HDAC1Q13547 482 aaPredicted RBP4.2□□□□□ -1.74
PHC3-213ENST00000491258 SYTL3Q4VX76 610 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 FAM209BQ5JX69 171 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 RNF144BQ7Z419 303 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 NRSN1Q8IZ57 195 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 ANKRD44Q8N8A2 993 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 IPO4Q8TEX9 1081 aaKnown RBP4.2□□□□□ -1.74
PHC3-213ENST00000491258 SECTM1Q8WVN6 248 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 CD101Q93033 1021 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 IFT27Q9BW83 186 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 LHPPQ9H008 270 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 TMEM248Q9NWD8 314 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 SEL1LQ9UBV2 794 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 CNTN6Q9UQ52 1028 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 PCDHAC2Q9Y5I4 1007 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 UGGT2Q9NYU1 1516 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 CD109Q6YHK3 1445 aa4.2□□□□□ -1.74
PHC3-213ENST00000491258 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.19□□□□□ -1.74
PHC3-213ENST00000491258 PLEKHD1A6NEE1 506 aa4.19□□□□□ -1.74
PHC3-213ENST00000491258 MBD3L5A6NJ08 208 aaPredicted RBP4.19□□□□□ -1.74
PHC3-213ENST00000491258 MMP3P08254 477 aa4.19□□□□□ -1.74
PHC3-213ENST00000491258 SLC5A1P13866 664 aa4.19□□□□□ -1.74
PHC3-213ENST00000491258 NPPBP16860 134 aa4.19□□□□□ -1.74
PHC3-213ENST00000491258 DGKAP23743 735 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms