RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 CD6P30203 668 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 HNRNPH3P31942 346 aaKnown RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 ACSL1P33121 698 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 PSMD8P48556 350 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 ADKP55263 362 aaKnown RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 ST8SIA6P61647 398 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 NRG1Q02297 640 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 LMNB2Q03252 620 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 GFPT1Q06210 699 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 ZNF33AQ06730 810 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 SEMA3BQ13214 749 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 RSPO4Q2I0M5 234 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 ARL13BQ3SXY8 428 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 POM121L1PQ3SYA9 428 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 LYSMD4Q5XG99 296 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 ZNF776Q68DI1 518 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 SLC36A4Q6YBV0 504 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 LEKR1Q6ZMV7 388 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 SLFN11Q7Z7L1 901 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 SETD3Q86TU7 594 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 C11orf74Q86VG3 221 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 CPNE8Q86YQ8 564 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 MMAAQ8IVH4 418 aaKnown RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 SH2D3CQ8N5H7 860 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 AADATQ8N5Z0 425 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 DCAF4L2Q8NA75 395 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 KDM1BQ8NB78 822 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 NETO2Q8NC67 525 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 NTAN1Q96AB6 310 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 TBC1D31Q96DN5 1066 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 BTBD6Q96KE9 485 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 FAM129BQ96TA1 746 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 DNAJC7Q99615 494 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 SPON2Q9BUD6 331 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 GPR174Q9BXC1 333 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 PACSIN1Q9BY11 444 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 OSBPL2Q9H1P3 480 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 PABPC3Q9H361 631 aaKnown RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 NOL6Q9H6R4 1146 aaKnown RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 VPS45Q9NRW7 570 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 WSB2Q9NYS7 404 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 PPARGC1AQ9UBK2 798 aaKnown RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 PCSK1NQ9UHG2 260 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 DNAI1Q9UI46 699 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 SARDHQ9UL12 918 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 PCDHGA5Q9Y5G8 931 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 CABIN1Q9Y6J0 2220 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 A0A1W2PP55 124 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ILVBLA1L0T0 632 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 H3BM21 787 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ATP9BO43861 1147 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 CREB3O43889 395 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 BNIP3LO60238 219 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 NDUFS2O75306 463 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 LRCH4O75427 683 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 CD160O95971 181 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 CFIP05156 583 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 TPM3P06753 285 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 CTSLP07711 333 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ACADMP11310 421 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 SRCP12931 536 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 RHOQP17081 205 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 IL1R2P27930 398 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 EPHB2P29323 1055 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 MIPP30301 263 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 L1CAMP32004 1257 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 DRD3P35462 400 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 GALCP54803 685 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 OXCT1P55809 520 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 IRX4P78413 519 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ARF5P84085 180 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 GNA12Q03113 381 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 PTSQ03393 145 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 SULT2A1Q06520 285 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 TBX2Q13207 712 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 BYSLQ13895 437 aaKnown RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ELAVL3Q14576 367 aaKnown RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 E2F5Q15329 346 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 DLG2Q15700 870 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 CST6Q15828 149 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 SMTNL2Q2TAL5 461 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ASTE1Q2TB18 679 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ACCSLQ4AC99 568 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 AASDHQ4L235 1098 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 OXLD1Q5BKU9 147 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 EFHC2Q5JST6 749 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 LCE2AQ5TA79 106 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 PEAR1Q5VY43 1037 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 TXNRD3NBQ6F5E7 133 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 PPP1R2P3Q6NXS1 205 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 C22orf39Q6P5X5 142 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ALKBH5Q6P6C2 394 aaKnown RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 LYSMD3Q7Z3D4 306 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ATP11CQ8NB49 1132 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 OR2I1PQ8NGU4 316 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 RNF217Q8TC41 542 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ARHGEF2Q92974 986 aaKnown RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 IQCDQ96DY2 449 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 TRIM11Q96F44 468 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms