RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 PRKD2Q9BZL6 878 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 PRKAG3Q9UGI9 489 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 ZFP37Q9Y6Q3 630 aaPredicted RBP11.83□□□□□ -0.52
PRKCB-207ENST00000486868 ZNF638Q14966 1978 aaKnown RBP11.83□□□□□ -0.52
PRKCB-207ENST00000486868 CEP350Q5VT06 3117 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 ZCWPW2A0A1B0GU75 182 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 TYW5A2RUC4 315 aaKnown RBP11.82□□□□□ -0.52
PRKCB-207ENST00000486868 J3KR12 359 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 PAPSS2O95340 614 aaPredicted RBP11.82□□□□□ -0.52
PRKCB-207ENST00000486868 PAPLNO95428 1278 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 ASMTLO95671 621 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 TCF3P15923 654 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 HOXD9P28356 352 aaPredicted RBP11.82□□□□□ -0.52
PRKCB-207ENST00000486868 GABRR2P28476 465 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 CTNNB1P35222 781 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 HADHAP40939 763 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 CCNFP41002 786 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 POLD2P49005 469 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 CLCN4P51793 760 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 SMAD3P84022 425 aaKnown RBP11.82□□□□□ -0.52
PRKCB-207ENST00000486868 IL9RQ01113 521 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 SPARCL1Q14515 664 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 RALGPS1Q5JS13 557 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 STXBP5Q5T5C0 1151 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 GRTP1Q5TC63 336 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 CASC4Q6P4E1 433 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 PKN3Q6P5Z2 889 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 GAREM2Q75VX8 874 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 CTAGE3PQ8IX95 158 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 PPM1NQ8N819 430 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 BANPQ8N9N5 519 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRKCB-207ENST00000486868 HJURPQ8NCD3 748 aaPredicted RBP11.82□□□□□ -0.52
PRKCB-207ENST00000486868 ARRDC2Q8TBH0 407 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 USP33Q8TEY7 942 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 CERS2Q96G23 380 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 ZNF419Q96HQ0 510 aaPredicted RBP11.82□□□□□ -0.52
PRKCB-207ENST00000486868 MRGPRX2Q96LB1 330 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 MAGEB18Q96M61 343 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 PRICKLE1Q96MT3 831 aaPredicted RBP11.82□□□□□ -0.52
PRKCB-207ENST00000486868 CCT8L2Q96SF2 557 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 CPNE1Q99829 537 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
PRKCB-207ENST00000486868 POLR1EQ9GZS1 481 aaKnown RBP11.82□□□□□ -0.52
PRKCB-207ENST00000486868 KCNK9Q9NPC2 374 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 TLR9Q9NR96 1032 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 SMYD2Q9NRG4 433 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 GKN1Q9NS71 199 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 SEPT3Q9UH03 358 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 RIMKLBQ9ULI2 386 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 RPS6KL1Q9Y6S9 549 aa11.82□□□□□ -0.52
PRKCB-207ENST00000486868 TRAV19A0A0A6YYK7 116 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 LOC285095A0A1B0GVY8 99 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 LINC01553A4QN01 128 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 CXorf49A8MYA2 514 aaPredicted RBP11.81□□□□□ -0.52
PRKCB-207ENST00000486868 SIN3BO75182 1162 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 RHOCP08134 193 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 CREB1P16220 341 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 KRT4P19013 534 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 ADRA1DP25100 572 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 GP5P40197 560 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 CSE1LP55060 971 aaKnown RBP11.81□□□□□ -0.52
PRKCB-207ENST00000486868 WNT3AP56704 352 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 ERVFC1P60507 584 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 SLC10A7Q0GE19 358 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 MPP2Q14168 576 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 EFTUD2Q15029 972 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRKCB-207ENST00000486868 ZSCAN26Q16670 478 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 INO80DQ53TQ3 878 aaPredicted RBP11.81□□□□□ -0.52
PRKCB-207ENST00000486868 PPM1LQ5SGD2 360 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 PDPK2PQ6A1A2 396 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 TRMT10BQ6PF06 316 aaKnown RBP11.81□□□□□ -0.52
PRKCB-207ENST00000486868 ELMSAN1Q6PJG2 1045 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 NLRP9Q7RTR0 991 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 C7orf61Q8IZ16 206 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 GABPB2Q8TAK5 448 aaPredicted RBP11.81□□□□□ -0.52
PRKCB-207ENST00000486868 ADAMTS19Q8TE59 1207 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 POF1BQ8WVV4 589 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 ISL2Q96A47 359 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 MYEOVQ96EZ4 313 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 FEM1CQ96JP0 617 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 PSKH2Q96QS6 385 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 MGME1Q9BQP7 344 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 NSRP1Q9H0G5 558 aaKnown RBP11.81□□□□□ -0.52
PRKCB-207ENST00000486868 ASAH2Q9NR71 780 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 ARHGAP26Q9UNA1 814 aa11.81□□□□□ -0.52
PRKCB-207ENST00000486868 ARIH1Q9Y4X5 557 aaPredicted RBP11.81□□□□□ -0.52
PRKCB-207ENST00000486868 A0A1W2PPM1 405 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 E2F8A0AVK6 867 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 NDUFAB1O14561 156 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 MT-CYBP00156 380 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 MMP2P08253 660 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 PTPN2P17706 415 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 PAMP19021 973 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 HLA-DPA1P20036 260 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 DNAJB1P25685 340 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 ACVRL1P37023 503 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 RPS24P62847 133 aaKnown RBP11.8□□□□□ -0.52
PRKCB-207ENST00000486868 MTM1Q13496 603 aa11.8□□□□□ -0.52
PRKCB-207ENST00000486868 DBN1Q16643 649 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms