RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 RABGAP1LQ5R372 815 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 PERM1Q5SV97 790 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 TCERG1LQ5VWI1 586 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 ATL3Q6DD88 541 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 CRTC1Q6UUV9 634 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 XKR5Q6UX68 686 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 KYAT3Q6YP21 454 aaKnown RBP11.65□□□□□ -0.54
BRCA1-213ENST00000476777 ATG14Q6ZNE5 492 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 ATP6V0D2Q8N8Y2 350 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 TMIEQ8NEW7 156 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 OR2A12Q8NGT7 310 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 SALL4Q9UJQ4 1053 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 VPS28Q9UK41 221 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 HS3ST2Q9Y278 367 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 PCDHB4Q9Y5E5 795 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 CCDC187A0A096LP49 1063 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 K7ELQ4 463 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-213ENST00000476777 MUSKO15146 869 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 AQP9O43315 295 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 SUV39H1O43463 412 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 NOBOXO60393 691 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 F13A1P00488 732 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 ITGB2P05107 769 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 ZSCAN22P10073 491 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-213ENST00000476777 SRCP12931 536 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 DNM1Q05193 864 aaKnown RBP11.64□□□□□ -0.55
BRCA1-213ENST00000476777 DRAP1Q14919 205 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-213ENST00000476777 NR0B2Q15466 257 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 ERN2Q76MJ5 926 aaKnown RBP11.64□□□□□ -0.55
BRCA1-213ENST00000476777 PARGQ86W56 976 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 SMYD4Q8IYR2 804 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-213ENST00000476777 EXTL1Q92935 676 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 KAT5Q92993 513 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 SLC35C1Q96A29 364 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 SGF29Q96ES7 293 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 TRIM62Q9BVG3 475 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 HDAC8Q9BY41 377 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 ST7Q9NRC1 585 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.64□□□□□ -0.55
BRCA1-213ENST00000476777 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
BRCA1-213ENST00000476777 SLC12A6Q9UHW9 1150 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 CFAP45Q9UL16 551 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 ITPR2Q14571 2701 aa11.64□□□□□ -0.55
BRCA1-213ENST00000476777 ICE1Q9Y2F5 2266 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
BRCA1-213ENST00000476777 H3BM21 787 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 K7ERQ8 282 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 TPP1O14773 563 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 RAD51BO15315 384 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 SLC16A3O15427 465 aaKnown RBP11.63□□□□□ -0.55
BRCA1-213ENST00000476777 SPINT1O43278 529 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 GJB6O95452 261 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 PRNPP04156 253 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 JUNDP17535 347 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 ACADSBP45954 432 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 YWHAZP63104 245 aaKnown RBP11.63□□□□□ -0.55
BRCA1-213ENST00000476777 SRSF6Q13247 344 aaKnown RBP11.63□□□□□ -0.55
BRCA1-213ENST00000476777 AUHQ13825 339 aaKnown RBP11.63□□□□□ -0.55
BRCA1-213ENST00000476777 TPRG1LQ5T0D9 272 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 ZNF574Q6ZN55 896 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-213ENST00000476777 USP53Q70EK8 1073 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 SLC35F3Q8IY50 421 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 CHST14Q8NCH0 376 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 LMX1AQ8TE12 382 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 RNF34Q969K3 372 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 RPRD1AQ96P16 312 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-213ENST00000476777 IL12RB2Q99665 862 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 BOCQ9BWV1 1114 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 SLC17A9Q9BYT1 436 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 POPDC2Q9HBU9 364 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 DYRK4Q9NR20 520 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 TBC1D30Q9Y2I9 924 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 PCDHGA7Q9Y5G6 932 aa11.63□□□□□ -0.55
BRCA1-213ENST00000476777 NTN3O00634 580 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-213ENST00000476777 PLD2O14939 933 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 SMAD6O43541 496 aaKnown RBP11.62□□□□□ -0.55
BRCA1-213ENST00000476777 SNAP91O60641 907 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 CLDN11O75508 207 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 GCATO75600 419 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 PAK4O96013 591 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-213ENST00000476777 FAM87AP0C7U9 286 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 SLC2A3P11169 496 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 RRM1P23921 792 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 SLC5A2P31639 672 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 CCR1P32246 355 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 SYKP43405 635 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 RABIFP47224 123 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 NDUFA8P51970 172 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 RPS21P63220 83 aaKnown RBP11.62□□□□□ -0.55
BRCA1-213ENST00000476777 EIF2B5Q13144 721 aaKnown RBP11.62□□□□□ -0.55
BRCA1-213ENST00000476777 PDE1CQ14123 709 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-213ENST00000476777 TAF5Q15542 800 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 TGIF1Q15583 401 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 ARSIQ5FYB1 569 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 KIAA1161Q6NSJ0 714 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 DENND1BQ6P3S1 775 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 TMEM110Q86TL2 294 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 ATP11CQ8NB49 1132 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 WDR48Q8TAF3 677 aa11.62□□□□□ -0.55
BRCA1-213ENST00000476777 GRIN3AQ8TCU5 1115 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms