RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 GARTP22102 1010 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 ADORA2BP29275 332 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
UBR4-210ENST00000466969 KIF11P52732 1056 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 THOP1P52888 689 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 CDH18Q13634 790 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 ELOCQ15369 112 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 HYIQ5T013 277 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 DCAF12Q5T6F0 453 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 PIP5KL1Q5T9C9 394 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 PIK3R6Q5UE93 754 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 SEL1L3Q68CR1 1132 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 LVRNQ6Q4G3 990 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 CLEC20AQ6ZU45 233 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 SPRED1Q7Z699 444 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 NRSN1Q8IZ57 195 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 ARHGAP18Q8N392 663 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 FSTL5Q8N475 847 aaPredicted RBP12.95□□□□□ -0.34
UBR4-210ENST00000466969 CARNMT1Q8N4J0 409 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 RCBTB1Q8NDN9 531 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 IRX2Q9BZI1 471 aaPredicted RBP12.95□□□□□ -0.34
UBR4-210ENST00000466969 PNPLA8Q9NP80 782 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 SLC39A1Q9NY26 324 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 ZFR2Q9UPR6 939 aaKnown RBP12.95□□□□□ -0.34
UBR4-210ENST00000466969 CYP46A1Q9Y6A2 500 aa12.95□□□□□ -0.34
UBR4-210ENST00000466969 PPP6R2O75170 966 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 PPP1R37O75864 691 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 SNRPB2P08579 225 aaKnown RBP12.94□□□□□ -0.34
UBR4-210ENST00000466969 ALPIP09923 528 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 FDPSP14324 419 aaKnown RBP12.94□□□□□ -0.34
UBR4-210ENST00000466969 COX6B1P14854 86 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 GLB1P16278 677 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 STK19P49842 368 aaPredicted RBP12.94□□□□□ -0.34
UBR4-210ENST00000466969 ARHGEF7Q14155 803 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 ERV3-1Q14264 604 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 JMJD6Q6NYC1 403 aaPredicted RBP12.94□□□□□ -0.34
UBR4-210ENST00000466969 RFWD3Q6PCD5 774 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 WDR49Q8IV35 697 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 SLC17A9Q9BYT1 436 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 RDH14Q9HBH5 336 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 MRPL40Q9NQ50 206 aaKnown RBP12.94□□□□□ -0.34
UBR4-210ENST00000466969 DYRK4Q9NR20 520 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 FAM49BQ9NUQ9 324 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 PCDHB13Q9Y5F0 798 aa12.94□□□□□ -0.34
UBR4-210ENST00000466969 MN1Q10571 1320 aaPredicted RBP12.93□□□□□ -0.34
UBR4-210ENST00000466969 TRPM6Q9BX84 2022 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 A6NCN8 305 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 IRAK2O43187 625 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 LRRTM2O43300 516 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 KRT86O43790 486 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 KIF20AO95235 890 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 CTDNEP1O95476 244 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 CPNE6O95741 557 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 PNLIPP16233 465 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 BPIP17213 487 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 TRIM21P19474 475 aaKnown RBP12.93□□□□□ -0.34
UBR4-210ENST00000466969 CSTF2P33240 577 aaKnown RBP eCLIP12.93□□□□□ -0.34
UBR4-210ENST00000466969 NDST1P52848 882 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 RAB15P59190 212 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 TRPC3Q13507 836 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 ACCSLQ4AC99 568 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 TPRG1LQ5T0D9 272 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 DTHD1Q6ZMT9 781 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 MMS22LQ6ZRQ5 1243 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 ZNF720Q7Z2F6 126 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 GPD1LQ8N335 351 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 AGBL5Q8NDL9 886 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 C19orf60Q96EN9 201 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 TEFMQ96QE5 360 aaKnown RBP12.93□□□□□ -0.34
UBR4-210ENST00000466969 SLC25A23Q9BV35 468 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 TMUB1Q9BVT8 246 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 TRIT1Q9H3H1 467 aaKnown RBP12.93□□□□□ -0.34
UBR4-210ENST00000466969 PCIF1Q9H4Z3 704 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 SMYD3Q9H7B4 428 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 COPG2Q9UBF2 871 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 CROTQ9UKG9 612 aa12.93□□□□□ -0.34
UBR4-210ENST00000466969 HBS1LQ9Y450 684 aaKnown RBP12.93□□□□□ -0.34
UBR4-210ENST00000466969 MRPS18BQ9Y676 258 aaKnown RBP12.93□□□□□ -0.34
UBR4-210ENST00000466969 ARHGEF17Q96PE2 2063 aaPredicted RBP12.92□□□□□ -0.34
UBR4-210ENST00000466969 ALOX15BO15296 676 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 PRICKLE3O43900 615 aaPredicted RBP12.92□□□□□ -0.34
UBR4-210ENST00000466969 ZG16O60844 167 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 DNAJB5O75953 348 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 CELA2BP08218 269 aaPredicted RBP12.92□□□□□ -0.34
UBR4-210ENST00000466969 CTSEP14091 401 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 BLKP51451 505 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 RPS21P63220 83 aaKnown RBP12.92□□□□□ -0.34
UBR4-210ENST00000466969 PPARDQ03181 441 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 TMEM259Q4ZIN3 620 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 GKN2Q86XP6 184 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 APLFQ8IW19 511 aaPredicted RBP12.92□□□□□ -0.34
UBR4-210ENST00000466969 SYCP3Q8IZU3 236 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 Q8NA96 180 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 HJURPQ8NCD3 748 aaPredicted RBP12.92□□□□□ -0.34
UBR4-210ENST00000466969 ACCSQ96QU6 501 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 OLA1Q9NTK5 396 aaKnown RBP12.92□□□□□ -0.34
UBR4-210ENST00000466969 NOL7Q9UMY1 257 aaKnown RBP12.92□□□□□ -0.34
UBR4-210ENST00000466969 USP3Q9Y6I4 520 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 RTTNQ86VV8 2226 aa12.92□□□□□ -0.34
UBR4-210ENST00000466969 ZNF233A6NK53 670 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms