RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 RECQLP46063 649 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-206ENST00000466532 CT47A1Q5JQC4 288 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-206ENST00000466532 ARTNQ5T4W7 220 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 RETSATQ6NUM9 610 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 NEK5Q6P3R8 708 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 ZNF783Q6ZMS7 281 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 KANSL1Q7Z3B3 1105 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 EMC1Q8N766 993 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 ZYG11BQ9C0D3 744 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 ZNF212Q9UDV6 495 aa19.58■□□□□ 0.72
COL9A3-206ENST00000466532 SDC3O75056 442 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 GFPT2O94808 682 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 ENDOD1O94919 500 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 THEGLP0DJG4 465 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 JUPP14923 745 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 CLDN6P56747 220 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 ATP11AP98196 1134 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 COL28A1Q2UY09 1125 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 ARSIQ5FYB1 569 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 DPY19L3Q6ZPD9 716 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 ERN2Q76MJ5 926 aaKnown RBP19.57■□□□□ 0.72
COL9A3-206ENST00000466532 ARCQ7LC44 396 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 HORMAD1Q86X24 394 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 ZNF677Q86XU0 584 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 DRC7Q8IY82 874 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 TMEM145Q8NBT3 493 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 SLC20A1Q8WUM9 679 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 HNRNPLLQ8WVV9 542 aaKnown RBP19.57■□□□□ 0.72
COL9A3-206ENST00000466532 TSC1Q92574 1164 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 PPP1R16AQ96I34 528 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 VPS16Q9H269 839 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 GANQ9H2C0 597 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 ATP13A1Q9HD20 1204 aa19.57■□□□□ 0.72
COL9A3-206ENST00000466532 NOCTQ9UK39 431 aaKnown RBP19.57■□□□□ 0.72
COL9A3-206ENST00000466532 LEFTY1O75610 366 aa19.56■□□□□ 0.72
COL9A3-206ENST00000466532 PCDH8O95206 1070 aa19.56■□□□□ 0.72
COL9A3-206ENST00000466532 SERPINH1P50454 418 aaKnown RBP19.56■□□□□ 0.72
COL9A3-206ENST00000466532 GNA12Q03113 381 aa19.56■□□□□ 0.72
COL9A3-206ENST00000466532 CDO1Q16878 200 aa19.56■□□□□ 0.72
COL9A3-206ENST00000466532 ZNF284Q2VY69 593 aa19.56■□□□□ 0.72
COL9A3-206ENST00000466532 HDAC8Q9BY41 377 aa19.56■□□□□ 0.72
COL9A3-206ENST00000466532 CEP44Q9C0F1 390 aa19.56■□□□□ 0.72
COL9A3-206ENST00000466532 FZD3Q9NPG1 666 aa19.56■□□□□ 0.72
COL9A3-206ENST00000466532 PPARGC1AQ9UBK2 798 aaKnown RBP19.56■□□□□ 0.72
COL9A3-206ENST00000466532 ZNF821O75541 412 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-206ENST00000466532 ZMPSTE24O75844 475 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 CKMT2P17540 419 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 HNRNPA2B1P22626 353 aaKnown RBP19.55■□□□□ 0.72
COL9A3-206ENST00000466532 AKT2P31751 481 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 KLK7P49862 253 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 DNA2P51530 1060 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 POLR2FP61218 127 aaKnown RBP19.55■□□□□ 0.72
COL9A3-206ENST00000466532 ARF5P84085 180 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 CDR2Q01850 454 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 SLC20A2Q08357 652 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 RAB6CQ53S08 254 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 HES3Q5TGS1 186 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 PHLDB2Q86SQ0 1253 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 PDZD3Q86UT5 571 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 PCDH20Q8N6Y1 951 aaKnown RBP19.55■□□□□ 0.72
COL9A3-206ENST00000466532 RAB6CQ9H0N0 254 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 ZFR2Q9UPR6 939 aaKnown RBP19.55■□□□□ 0.72
COL9A3-206ENST00000466532 WASF2Q9Y6W5 498 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 CELSR3Q9NYQ7 3312 aa19.55■□□□□ 0.72
COL9A3-206ENST00000466532 SHROOM3Q8TF72 1996 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 CYP1A1P04798 512 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-206ENST00000466532 MMP8P22894 467 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 SDC4P31431 198 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 NEK3P51956 506 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 FMO1Q01740 532 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 ILKQ13418 452 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 C15orf59Q2T9L4 293 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-206ENST00000466532 ARL13BQ3SXY8 428 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 CARD16Q5EG05 197 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 SEL1L3Q68CR1 1132 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 FBXL19Q6PCT2 694 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 ENOX1Q8TC92 643 aaKnown RBP19.54■□□□□ 0.72
COL9A3-206ENST00000466532 RXFP2Q8WXD0 754 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 NXPE2Q96DL1 559 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 HEPHQ9BQS7 1158 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 C11orf70Q9BRQ4 267 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 CALN1Q9BXU9 219 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 NLRC4Q9NPP4 1024 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 SCUBE2Q9NQ36 999 aa19.54■□□□□ 0.72
COL9A3-206ENST00000466532 FAM207AQ9NSI2 230 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-206ENST00000466532 FCF1Q9Y324 198 aaKnown RBP19.54■□□□□ 0.72
COL9A3-206ENST00000466532 LRRK1Q38SD2 2015 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 TPM2P07951 284 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 CHRNB2P17787 502 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 ITGB7P26010 798 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 SOX5P35711 763 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 CCNHP51946 323 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-206ENST00000466532 JAM2P57087 298 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 CLDN2P57739 230 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 KRT31Q15323 416 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 PROX2Q3B8N5 592 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 CCDC14Q49A88 953 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 TMEM259Q4ZIN3 620 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 CDKAL1Q5VV42 579 aa19.53■□□□□ 0.72
COL9A3-206ENST00000466532 RWDD4Q6NW29 188 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms