RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 AAGABQ6PD74 315 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 PIP4P1Q86T03 277 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 TRIM74Q86UV6 250 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 TRIM73Q86UV7 250 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 WDR5BQ86VZ2 330 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 NANOGP1Q8N7R0 232 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 LRRC57Q8N9N7 239 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 SLC44A5Q8NCS7 719 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 NAXEQ8NCW5 288 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 ZNF548Q8NEK5 533 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 TBC1D22AQ8WUA7 517 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 RAB40AQ8WXH6 277 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 CNOT9Q92600 299 aaKnown RBP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 MSI2Q96DH6 328 aaKnown RBP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 CLMNQ96JQ2 1002 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 SEC62Q99442 399 aaKnown RBP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 CD180Q99467 661 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 NPLQ9BXD5 320 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 EPHX3Q9H6B9 360 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 CDH22Q9UJ99 828 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 SLC13A4Q9UKG4 626 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 ZNF335Q9H4Z2 1342 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 DDTLA6NHG4 134 aaPredicted RBP4.38□□□□□ -1.71
PTPN12-210ENST00000464313 PRPF4O43172 522 aaKnown RBP eCLIP4.38□□□□□ -1.71
PTPN12-210ENST00000464313 CEP104O60308 925 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 PRF1P14222 555 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 ABCD3P28288 659 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 SLC16A2P36021 539 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 SKIV2L2P42285 1042 aaKnown RBP4.38□□□□□ -1.71
PTPN12-210ENST00000464313 RPP30P78346 268 aaKnown RBP4.38□□□□□ -1.71
PTPN12-210ENST00000464313 PKP1Q13835 747 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 INPP5JQ15735 1006 aaPredicted RBP4.38□□□□□ -1.71
PTPN12-210ENST00000464313 RPE65Q16518 533 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 ME3Q16798 604 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 SLC4A8Q2Y0W8 1093 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 ODF3L2Q3SX64 289 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 ZNF667Q5HYK9 610 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 TBC1D9BQ66K14 1250 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 NUGGCQ68CJ6 796 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 KDELC2Q7Z4H8 507 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 TCP11L2Q8N4U5 519 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 PLD5Q8N7P1 536 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 C16orf52Q8NHV5 167 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 RPL36ALQ969Q0 106 aaKnown RBP4.38□□□□□ -1.71
PTPN12-210ENST00000464313 ZUFSPQ96AP4 578 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 APOPT1Q96IL0 206 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 MPHOSPH8Q99549 860 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 WDR83Q9BRX9 315 aaKnown RBP4.38□□□□□ -1.71
PTPN12-210ENST00000464313 PAIP1Q9H074 479 aaKnown RBP4.38□□□□□ -1.71
PTPN12-210ENST00000464313 INTS2Q9H0H0 1204 aaKnown RBP4.38□□□□□ -1.71
PTPN12-210ENST00000464313 CNOT7Q9UIV1 285 aaKnown RBP4.38□□□□□ -1.71
PTPN12-210ENST00000464313 OSGIN2Q9Y236 505 aa4.38□□□□□ -1.71
PTPN12-210ENST00000464313 TMEM272A0A1B0GTI8 110 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 PABPN1LA6NDY0 278 aaKnown RBP4.37□□□□□ -1.71
PTPN12-210ENST00000464313 TMEM247A6NEH6 219 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 ATG13O75143 517 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 TMCC1O94876 653 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 FGBP02675 491 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 URODP06132 367 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 CHRM4P08173 479 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 CDH15P55291 814 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 IGFN1Q86VF2 1251 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 SLC25A41Q8N5S1 370 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 DPP10Q8N608 796 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 DNAAF1Q8NEP3 725 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 DENND1AQ8TEH3 1009 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 HSPH1Q92598 858 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 ATOH1Q92858 354 aaPredicted RBP4.37□□□□□ -1.71
PTPN12-210ENST00000464313 RNF125Q96EQ8 232 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 ZFYVE19Q96K21 471 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 PPM1MQ96MI6 270 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 TEFMQ96QE5 360 aaKnown RBP4.37□□□□□ -1.71
PTPN12-210ENST00000464313 FUZQ9BT04 418 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 WACQ9BTA9 647 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 MAP6D1Q9H9H5 199 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 PNRC2Q9NPJ4 139 aaKnown RBP4.37□□□□□ -1.71
PTPN12-210ENST00000464313 ATP8A2Q9NTI2 1148 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 ZDHHC7Q9NXF8 308 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 TUBA8Q9NY65 449 aaPredicted RBP4.37□□□□□ -1.71
PTPN12-210ENST00000464313 GRHL1Q9NZI5 618 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 PCDHA12Q9UN75 941 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 RAP2CQ9Y3L5 183 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 MST1RQ04912 1400 aa4.37□□□□□ -1.71
PTPN12-210ENST00000464313 CCDC196A0A1B0GTZ2 297 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 CYSRT1A8MQ03 144 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 J3KRW8 73 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 TNPO2O14787 897 aaKnown RBP4.36□□□□□ -1.71
PTPN12-210ENST00000464313 TULP3O75386 442 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 NTN1O95631 604 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 IL1AP01583 271 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 LCKP06239 509 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 TNFSF8P32971 234 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 CCT4P50991 539 aaKnown RBP4.36□□□□□ -1.71
PTPN12-210ENST00000464313 TBX2Q13207 712 aaPredicted RBP4.36□□□□□ -1.71
PTPN12-210ENST00000464313 ZNF766Q5HY98 468 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 FAM69AQ5T7M9 428 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 TMEM268Q5VZI3 342 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 RUSC1-AS1Q66K80 236 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 MOB3CQ70IA8 216 aa4.36□□□□□ -1.71
PTPN12-210ENST00000464313 H1FNTQ75WM6 255 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms