RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ALFQ53S48 1182 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 BRMS1LQ5PSV4 323 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 ISM2Q6H9L7 571 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 C22orf39Q6P5X5 142 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 KYAT3Q6YP21 454 aaKnown RBP10.67□□□□□ -0.7
HDLBP-227ENST00000458564 FAM183BPQ6ZVS7 135 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 ERN2Q76MJ5 926 aaKnown RBP10.67□□□□□ -0.7
HDLBP-227ENST00000458564 C14orf80Q86SX3 495 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 ZNF605Q86T29 641 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 ATP11CQ8NB49 1132 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 C1orf131Q8NDD1 294 aaKnown RBP10.67□□□□□ -0.7
HDLBP-227ENST00000458564 NT5C3BQ969T7 300 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 GRAMD1AQ96CP6 724 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 PGAP3Q96FM1 320 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-227ENST00000458564 PPP1R16AQ96I34 528 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 MYOCQ99972 504 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 CALN1Q9BXU9 219 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 POLR1BQ9H9Y6 1135 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 FZD3Q9NPG1 666 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 ASCL3Q9NQ33 180 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 DYRK4Q9NR20 520 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 PIGVQ9NUD9 493 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 APEX2Q9UBZ4 518 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 SSUH2Q9Y2M2 353 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 HS3ST3A1Q9Y663 406 aa10.67□□□□□ -0.7
HDLBP-227ENST00000458564 GTPBP10A4D1E9 387 aaKnown RBP10.66□□□□□ -0.7
HDLBP-227ENST00000458564 DRGXA6NNA5 263 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 I6L893 689 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-227ENST00000458564 K7ERQ8 282 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 K7ESM1 405 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 M0QYT0 321 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 SMAD6O43541 496 aaKnown RBP10.66□□□□□ -0.7
HDLBP-227ENST00000458564 AP1G1O43747 822 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 BNIP3LO60238 219 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 USP12O75317 370 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 CSO75390 466 aaKnown RBP10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ZNF821O75541 412 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-227ENST00000458564 CNTN5O94779 1100 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ZIC2O95409 532 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ADCY5O95622 1261 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 CSF2P04141 144 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ERBB2P04626 1255 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 MPOP05164 745 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 RHOCP08134 193 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 NME1P15531 152 aaKnown RBP10.66□□□□□ -0.7
HDLBP-227ENST00000458564 RRM1P23921 792 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ITGB7P26010 798 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 NEK3P51956 506 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 CLDN2P57739 230 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 SNX16P57768 344 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 SKOR1P84550 965 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 SLC6A3Q01959 620 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 CFHR1Q03591 330 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 PTPN20Q4JDL3 420 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ARTNQ5T4W7 220 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 BROXQ5VW32 411 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 SEL1L3Q68CR1 1132 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 KIAA1161Q6NSJ0 714 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ZCCHC8Q6NZY4 707 aaKnown RBP10.66□□□□□ -0.7
HDLBP-227ENST00000458564 GJB7Q6PEY0 223 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ZNF783Q6ZMS7 281 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 TMC6Q7Z403 805 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 PARGQ86W56 976 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ZDHHC17Q8IUH5 632 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 PASD1Q8IV76 773 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 CHST14Q8NCH0 376 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ZNF548Q8NEK5 533 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-227ENST00000458564 KLK6Q92876 244 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 BMFQ96LC9 184 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 C1orf74Q96LT6 269 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 NPY6RQ99463 290 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 SRRTQ9BXP5 876 aaKnown RBP10.66□□□□□ -0.7
HDLBP-227ENST00000458564 DPH1Q9BZG8 443 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 CEP44Q9C0F1 390 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 TKTL2Q9H0I9 626 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 ANLNQ9NQW6 1124 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 THSD1Q9NS62 852 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 NCKIPSDQ9NZQ3 722 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 IL36AQ9UHA7 158 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 PAXBP1Q9Y5B6 917 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 CSNK1G3Q9Y6M4 447 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 WASF2Q9Y6W5 498 aa10.66□□□□□ -0.7
HDLBP-227ENST00000458564 MAST4O15021 2626 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 A0A0D9SEW6 157 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 SPTY2D1-AS1A0A0U1RR47 76 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 CXorf51AA0A1B0GTR3 108 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 RNF103O00237 685 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 LEFTY1O75610 366 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 PCDH8O95206 1070 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 FGFR1OPO95684 399 aaKnown RBP10.65□□□□□ -0.7
HDLBP-227ENST00000458564 ADRB3P13945 408 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 SCNN1AP37088 669 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 RABIFP47224 123 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 RPS21P63220 83 aaKnown RBP10.65□□□□□ -0.7
HDLBP-227ENST00000458564 FGL2Q14314 439 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 FZD2Q14332 565 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 ISXQ2M1V0 245 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 ARSIQ5FYB1 569 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 OR6B2Q6IFH4 312 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 DPY19L3Q6ZPD9 716 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms