RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 AVENQ9NQS1 362 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CD300AQ9UGN4 299 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TMED5Q9Y3A6 229 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SNX13Q9Y5W8 968 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 COPG1Q9Y678 874 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 NRAPQ86VF7 1730 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ANK1P16157 1881 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 A0A0B4J293 547 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 NME4O00746 187 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 EI24O14681 340 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 HCRTO43612 131 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TOM1L1O75674 476 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 RGS20O76081 388 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 PSMC3P17980 439 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 YWHAQP27348 245 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 WEE1P30291 646 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 GGT5P36269 586 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 HARS2P49590 506 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 NLRP11P59045 1033 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ALDH6A1Q02252 535 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 WASHC5Q12768 1159 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TCP10Q12799 353 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SLAMF1Q13291 335 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TFDP3Q5H9I0 405 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SNAP47Q5SQN1 464 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ANGEL2Q5VTE6 544 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 APOBEC3HQ6NTF7 200 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 DZIP1Q86YF9 867 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 HID1Q8IV36 788 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 THNSL1Q8IYQ7 743 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ABRAQ8N0Z2 381 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CELF2-AS1Q8N7Q2 184 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SCAIQ8N9R8 606 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 FBXL13Q8NEE6 735 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 DDHD1Q8NEL9 900 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 RNF31Q96EP0 1072 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CERS2Q96G23 380 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SPATA17Q96L03 361 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 NEDD4LQ96PU5 975 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SDHCQ99643 169 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TMEM79Q9BSE2 394 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 R3HDMLQ9H3Y0 253 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 WDR6Q9NNW5 1121 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC52A3Q9NQ40 469 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 FBXL12Q9NXK8 326 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 DDX56Q9NY93 547 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 KNTC1P50748 2209 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 UNC13CQ8NB66 2214 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF407Q9C0G0 2248 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 NRCAMQ92823 1304 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ARHGEF37A1IGU5 675 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 COPEO14579 308 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 RBP1P09455 135 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CBLP22681 906 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 MIPP30301 263 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 NPTX2P47972 431 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CSRP3P50461 194 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 PLA2G16P53816 162 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 GTF2BQ00403 316 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 PRKCQQ04759 706 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CBX2Q14781 532 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 NFIL3Q16649 462 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CTU2Q2VPK5 515 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 EPGNQ6UW88 154 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TPTE2Q6XPS3 522 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 GK5Q6ZS86 529 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CENPUQ71F23 418 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 BRINP3Q76B58 766 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 HERC6Q8IVU3 1022 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CENPLQ8N0S6 344 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TMEM35BQ8NCS4 154 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 GSDMBQ8TAX9 411 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TRIM11Q96F44 468 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF668Q96K58 619 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 BIRC8Q96P09 236 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 GDF15Q99988 308 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 AMBRA1Q9C0C7 1298 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CASS4Q9NQ75 786 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TMEM39AQ9NV64 488 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 LARSQ9P2J5 1176 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 COPG2Q9UBF2 871 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ERVK-11Q9UQG0 969 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 DRG1Q9Y295 367 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 PCDHB2Q9Y5E7 798 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 GREB1LQ9C091 1923 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 GTF3C1Q12789 2109 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 DYTNA2CJ06 578 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM189A1O60320 539 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 GDF11O95390 407 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ERVK-10P10266 1014 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 DCKP27707 260 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 TNFSF9P41273 254 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 NKX3-2P78367 333 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CAV1Q03135 178 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FLOT2Q14254 428 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 NR1D2Q14995 579 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SMN1Q16637 294 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FBXO48Q5FWF7 155 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SIGIRRQ6IA17 410 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 DENND1BQ6P3S1 775 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms