RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 U3KQA8 63 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 ARID2Q68CP9 1835 aa5.29□□□□□ -1.56
SDCBP-205ENST00000447267 ZNF469Q96JG9 3925 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-205ENST00000447267 BAZ2BQ9UIF8 2168 aaKnown RBP5.29□□□□□ -1.56
SDCBP-205ENST00000447267 TCRBV5S2A0A599 114 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 CPED1A4D0V7 1026 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 C2orf78A6NCI8 922 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 PRRT4C9JH25 899 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 FAM86B1E9PN63 330 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 DDX3XO00571 662 aaKnown RBP eCLIP5.28□□□□□ -1.566e-20■□□□□ 10.5
SDCBP-205ENST00000447267 PODXLO00592 558 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 YKT6O15498 198 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 CHMP2AO43633 222 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 JAK2O60674 1132 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 TADA3O75528 432 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 CNTN5O94779 1100 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 CBX6O95503 412 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 ZFYP08048 801 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 FAM86B2P0C5J1 330 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 ACADMP11310 421 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 CAPN3P20807 821 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 ERCC5P28715 1186 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 MARCKSP29966 332 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 EIF2DP41214 584 aaKnown RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 GPR15P49685 360 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 PDX1P52945 283 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 DMP1Q13316 513 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 VEPH1Q14D04 833 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 MGAT5BQ3V5L5 792 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 LY6G5CQ5SRR4 150 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 ACBD5Q5T8D3 534 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 RBM44Q6ZP01 1051 aaKnown RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 SPATS2Q86XZ4 545 aaKnown RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 SMAP1Q8IYB5 467 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 APOBEC4Q8WW27 367 aaKnown RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 ESR2Q92731 530 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 MBD6Q96DN6 1003 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 RRP36Q96EU6 259 aaKnown RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 TRMT2BQ96GJ1 504 aaKnown RBP5.28□□□□□ -1.56
SDCBP-205ENST00000447267 APOLD1Q96LR9 279 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 SLITRK1Q96PX8 696 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 RANBP9Q96S59 729 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 ZNF577Q9BSK1 485 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 NUB1Q9Y5A7 615 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 NBEAL2Q6ZNJ1 2754 aa5.28□□□□□ -1.56
SDCBP-205ENST00000447267 MYH9P35579 1960 aaKnown RBP5.27□□□□□ -1.57
SDCBP-205ENST00000447267 TRAV19A0A0A6YYK7 116 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 A0A1B0GUA9 196 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 A0A1W2PR77 199 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 hCG_1642624A0A1W2PR95 340 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 TARSL2A2RTX5 802 aaKnown RBP5.27□□□□□ -1.57
SDCBP-205ENST00000447267 FAM47DPA6NHR8 397 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-205ENST00000447267 LEFTY2O00292 366 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 NVLO15381 856 aaKnown RBP5.27□□□□□ -1.57
SDCBP-205ENST00000447267 LRRTM2O43300 516 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 SMARCA5O60264 1052 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-205ENST00000447267 DDAH1O94760 285 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 F9P00740 461 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 IGLV3-19P01714 112 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 IGHV4-34P06331 123 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 LIFP15018 202 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 ZNF28P17035 718 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 ITIH1P19827 911 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 ITGA3P26006 1051 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 SMARCA1P28370 1054 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 ETV5P41161 510 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 RXRGP48443 463 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 NXPH1P58417 271 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 MBTD1Q05BQ5 628 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 DRAP1Q14919 205 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-205ENST00000447267 CDKN3Q16667 212 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 ZRANB3Q5FWF4 1079 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 XKR3Q5GH77 459 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 ATP1A1-AS1Q5TC04 95 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 NUGGCQ68CJ6 796 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 TCTN3Q6NUS6 607 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 RAB11FIP2Q7L804 512 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 IQCA1Q86XH1 822 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 TERB1Q8NA31 727 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 PSPC1Q8WXF1 523 aaKnown RBP5.27□□□□□ -1.57
SDCBP-205ENST00000447267 PRCCQ92733 491 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-205ENST00000447267 USP7Q93009 1102 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 GJA10Q969M2 543 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 LENG9Q96B70 501 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 SYNDIG1Q9H7V2 258 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 EPB41L5Q9HCM4 733 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 GCNT4Q9P109 453 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 DEC1Q9P2X7 70 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 CNOT11Q9UKZ1 510 aaKnown RBP5.27□□□□□ -1.57
SDCBP-205ENST00000447267 PCDHB6Q9Y5E3 794 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 NPFFR2Q9Y5X5 522 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 STON1Q9Y6Q2 735 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 PKD1L1Q8TDX9 2849 aa5.27□□□□□ -1.57
SDCBP-205ENST00000447267 ANK1P16157 1881 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 SMIM28A0A1B0GU29 152 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 A0A1W2PQU0 124 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 TLR4O00206 839 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 SEMA4FO95754 770 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 GP1BAP07359 652 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 246.5 ms