RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	RNF139	Q8WU17	664 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	NXNL1	Q96CM4	212 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	SPATA13	Q96N96	652 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	KCNK16	Q96T55	309 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	BCO2	Q9BYV7	579 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	SPATC1L	Q9H0A9	340 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	STK32B	Q9NY57	414 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	PPME1	Q9Y570	386 aa		12.75	□□□□□ -0.37
DDR1-238	ENST00000446312	ZNF839	A8K0R7	811 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	TRDMT1	O14717	391 aa	Known RBP	12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	TIPRL	O75663	272 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	RNASEH2A	O75792	299 aa	Known RBP	12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	GSTT2	P0CG29	244 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	GSTT2B	P0CG30	244 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	PSMC3	P17980	439 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	NFKB1	P19838	968 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	HAL	P42357	657 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	CHRNA4	P43681	627 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	STT3A	P46977	705 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	PHEX	P78562	749 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	PDAP1	Q13442	181 aa	Known RBP	12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	CSHL1	Q14406	222 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	ITPRIPL1	Q6GPH6	555 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	PIGZ	Q86VD9	579 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	DCBLD1	Q8N8Z6	715 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	TMEM174	Q8WUU8	243 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	ACE2	Q9BYF1	805 aa	Predicted RBP	12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	CDH19	Q9H159	772 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	MOCS1	Q9NZB8	636 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	EEF2K	O00418	725 aa	Known RBP	12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	TFAP2A	P05549	437 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	YAP1	P46937	504 aa	Known RBP	12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	LAMC2	Q13753	1193 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	VGLL4	Q14135	290 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	PDK2	Q15119	407 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	SCIMP	Q6UWF3	145 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	KY	Q8NBH2	561 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	AGBL3	Q8NEM8	1001 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	CEP295NL	Q96MC4	621 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	OLFM3	Q96PB7	478 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	CCT7	Q99832	543 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	NOL11	Q9H8H0	719 aa	Known RBP	12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	TRPC7	Q9HCX4	862 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	XPR1	Q9UBH6	696 aa		12.74	□□□□□ -0.37
DDR1-238	ENST00000446312	BCLAF3	A2AJT9	711 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	KLF11	O14901	512 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	TFEB	P19484	476 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	GP5	P40197	560 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	ARL1	P40616	181 aa	Predicted RBP	12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	SERPINB9	P50453	376 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	MYBPC1	Q00872	1141 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	TAZ	Q16635	292 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	AGK	Q53H12	422 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	DCAF15	Q66K64	600 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	SEL1L3	Q68CR1	1132 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	LCLAT1	Q6UWP7	414 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	KCNMB4	Q86W47	210 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	VPS39	Q96JC1	886 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	BFAR	Q9NZS9	450 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	DSE	Q9UL01	958 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	SYNPO2	Q9UMS6	1093 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	MKI67	P46013	3256 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	TTC3	P53804	2025 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	TRIM13	O60858	407 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	ERCC2	P18074	760 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	ADCYAP1R1	P41586	468 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	AP3M2	P53677	418 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	GSTM4	Q03013	218 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	ITK	Q08881	620 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	KRT80	Q6KB66	452 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	TMEM214	Q6NUQ4	689 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	UGT2A3	Q6UWM9	527 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	KYAT3	Q6YP21	454 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	PARP8	Q8N3A8	854 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	SNX25	Q9H3E2	840 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	COQ10B	Q9H8M1	238 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	LRRC4	Q9HBW1	653 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	THEG	Q9P2T0	379 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	DCDC2	Q9UHG0	476 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	MCM3AP	O60318	1980 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	GOLGA8CP	A6NN73	597 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	USP17L7	P0C7H9	530 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	NCAM1	P13591	858 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	CHRM3	P20309	590 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	CSE1L	P55060	971 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	ACTRT2	Q8TDY3	377 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	ELMO2	Q96JJ3	720 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	ZFP42	Q96MM3	310 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	TSNARE1	Q96NA8	513 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	SLC29A1	Q99808	456 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	FZD8	Q9H461	694 aa		12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	RPL26L1	Q9UNX3	145 aa	Known RBP	12.73	□□□□□ -0.37
DDR1-238	ENST00000446312	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.72	□□□□□ -0.37
DDR1-238	ENST00000446312	VILL	O15195	856 aa		12.72	□□□□□ -0.37
DDR1-238	ENST00000446312	SMIM18	P0DKX4	95 aa		12.72	□□□□□ -0.37
DDR1-238	ENST00000446312	YWHAQ	P27348	245 aa		12.72	□□□□□ -0.37
DDR1-238	ENST00000446312	GARS	P41250	739 aa	Known RBP	12.72	□□□□□ -0.37
DDR1-238	ENST00000446312	MAP3K10	Q02779	954 aa		12.72	□□□□□ -0.37

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