RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 ARSIQ5FYB1 569 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 CDCP2Q5VXM1 449 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 SEL1L3Q68CR1 1132 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 C22orf39Q6P5X5 142 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 LINGO4Q6UY18 593 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 ABI3BPQ7Z7G0 1075 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 SETD3Q86TU7 594 aaPredicted RBP19.56■□□□□ 0.72
MUC1-211ENST00000438413 ZNF683Q8IZ20 524 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 ZNF248Q8NDW4 579 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 PPP1R16AQ96I34 528 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 APOLD1Q96LR9 279 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 DEPDC7Q96QD5 511 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 HDAC8Q9BY41 377 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 TNKS2Q9H2K2 1166 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 NLGN3Q9NZ94 848 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 STAP1Q9ULZ2 295 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 SNX10Q9Y5X0 201 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 HELZ2Q9BYK8 2649 aaKnown RBP19.56■□□□□ 0.72
MUC1-211ENST00000438413 TRPM6Q9BX84 2022 aa19.56■□□□□ 0.72
MUC1-211ENST00000438413 KALRNO60229 2985 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 NEMP2A6NFY4 417 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 A6NNZ2 444 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 I6L893 689 aaPredicted RBP19.55■□□□□ 0.72
MUC1-211ENST00000438413 MPOP05164 745 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 TFE3P19532 575 aaPredicted RBP19.55■□□□□ 0.72
MUC1-211ENST00000438413 RECQLP46063 649 aaPredicted RBP19.55■□□□□ 0.72
MUC1-211ENST00000438413 PCBP4P57723 403 aaKnown RBP19.55■□□□□ 0.72
MUC1-211ENST00000438413 RNASE9P60153 205 aaKnown RBP19.55■□□□□ 0.72
MUC1-211ENST00000438413 TMEM259Q4ZIN3 620 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 LRRC31Q6UY01 552 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 PTAR1Q7Z6K3 402 aaPredicted RBP19.55■□□□□ 0.72
MUC1-211ENST00000438413 TFAP2DQ7Z6R9 452 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 ZDHHC17Q8IUH5 632 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 FAM174AQ8TBP5 190 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 IFT43Q96FT9 208 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 PLCB1Q9NQ66 1216 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 DNAJC28Q9NX36 388 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.55■□□□□ 0.72
MUC1-211ENST00000438413 MPP6Q9NZW5 540 aa19.55■□□□□ 0.72
MUC1-211ENST00000438413 AJAP1Q9UKB5 411 aaPredicted RBP19.55■□□□□ 0.72
MUC1-211ENST00000438413 DRGXA6NNA5 263 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 LEFTY1O75610 366 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 GP1BAP07359 652 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 MYF5P13349 255 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 PON1P27169 355 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 NEK3P51956 506 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 GABREP78334 506 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 DEUP1Q05D60 604 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 ZNF542PQ5EBM4 170 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 DPY19L3Q6ZPD9 716 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 Q6ZSR6 202 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 SLC47A2Q86VL8 602 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 NAF1Q96HR8 494 aaKnown RBP19.54■□□□□ 0.72
MUC1-211ENST00000438413 ZNF578Q96N58 590 aaPredicted RBP19.54■□□□□ 0.72
MUC1-211ENST00000438413 EVA1BQ9NVM1 165 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 PAXBP1Q9Y5B6 917 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 WASF2Q9Y6W5 498 aa19.54■□□□□ 0.72
MUC1-211ENST00000438413 LY6G6EA0A0G2JKS1 128 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 GTPBP10A4D1E9 387 aaKnown RBP19.53■□□□□ 0.72
MUC1-211ENST00000438413 SCAMP1O15126 338 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 USP12O75317 370 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 CSO75390 466 aaKnown RBP19.53■□□□□ 0.72
MUC1-211ENST00000438413 NEBLO76041 1014 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 ENDOD1O94919 500 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 OR1E1P30953 314 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 CLCN1P35523 988 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 DUSP3P51452 185 aaPredicted RBP19.53■□□□□ 0.72
MUC1-211ENST00000438413 HNRNPKP61978 463 aaKnown RBP eCLIP19.53■□□□□ 0.724e-6■■□□□ 12.2
MUC1-211ENST00000438413 MAPK8IP2Q13387 824 aaPredicted RBP19.53■□□□□ 0.72
MUC1-211ENST00000438413 SMYD5Q6GMV2 418 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 KIAA1161Q6NSJ0 714 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 DCP2Q8IU60 420 aaKnown RBP19.53■□□□□ 0.72
MUC1-211ENST00000438413 LSMEM2Q8N112 164 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 FAM181AQ8N9Y4 354 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 OR7D4Q8NG98 312 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 NT5C3BQ969T7 300 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 PGAP3Q96FM1 320 aaPredicted RBP19.53■□□□□ 0.72
MUC1-211ENST00000438413 BMFQ96LC9 184 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 C1orf74Q96LT6 269 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 TBCBQ99426 244 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 DUSP23Q9BVJ7 150 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 SLC17A9Q9BYT1 436 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 ABCG4Q9H172 646 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 USP29Q9HBJ7 922 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 SIX2Q9NPC8 291 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 TMPRSS4Q9NRS4 437 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 GPR27Q9NS67 375 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 RWDD2AQ9UIY3 292 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 DNAJC12Q9UKB3 198 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 HS3ST3A1Q9Y663 406 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 U3KQA8 63 aa19.53■□□□□ 0.72
MUC1-211ENST00000438413 IGLV3-10A0A075B6K4 115 aa19.52■□□□□ 0.72
MUC1-211ENST00000438413 POM121BA6NF01 834 aa19.52■□□□□ 0.72
MUC1-211ENST00000438413 K7ESM1 405 aa19.52■□□□□ 0.72
MUC1-211ENST00000438413 F9P00740 461 aa19.52■□□□□ 0.72
MUC1-211ENST00000438413 PNMA6AP0CW24 399 aaPredicted RBP19.52■□□□□ 0.72
MUC1-211ENST00000438413 ADRB3P13945 408 aa19.52■□□□□ 0.72
MUC1-211ENST00000438413 RPS21P63220 83 aaKnown RBP19.52■□□□□ 0.72
MUC1-211ENST00000438413 ACBD5Q5T8D3 534 aaPredicted RBP19.52■□□□□ 0.72
MUC1-211ENST00000438413 RETSATQ6NUM9 610 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms