RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 HS3ST3A1Q9Y663 406 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 KCNE2Q9Y6J6 123 aa6.36□□□□□ -1.39
USP54-206ENST00000433394 NPIPB15A6NHN6 443 aaPredicted RBP6.35□□□□□ -1.39
USP54-206ENST00000433394 MGST3O14880 152 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 DOK2O60496 412 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 ADAP00813 363 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 CYP2A6P11509 494 aaPredicted RBP6.35□□□□□ -1.39
USP54-206ENST00000433394 SLC2A4P14672 509 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 KLRC2P26717 231 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 SOX2P48431 317 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 CHAF1BQ13112 559 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 DPCR1Q3MIW9 517 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 SERTAD4-AS1Q5TG53 156 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 NAPEPLDQ6IQ20 393 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 ZNF813Q6ZN06 617 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 IKBIPQ70UQ0 350 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 ZNF627Q7L945 461 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 TFAP2DQ7Z6R9 452 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 CCDC25Q86WR0 208 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 DPP10Q8N608 796 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 USP6NLQ92738 828 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 CLSTN3Q9BQT9 956 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 EFHD1Q9BUP0 239 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 MAK16Q9BXY0 300 aaKnown RBP6.35□□□□□ -1.39
USP54-206ENST00000433394 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 USP44Q9H0E7 712 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 ACTR5Q9H9F9 607 aaPredicted RBP6.35□□□□□ -1.39
USP54-206ENST00000433394 PCDHB16Q9NRJ7 776 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 SEPT11Q9NVA2 429 aaKnown RBP6.35□□□□□ -1.39
USP54-206ENST00000433394 KIAA1456Q9P272 454 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 ICKQ9UPZ9 632 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 TMEM5Q9Y2B1 443 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 CLDN16Q9Y5I7 305 aa6.35□□□□□ -1.39
USP54-206ENST00000433394 CXorf65A6NEN9 183 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 MYO1GB0I1T2 1018 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 B8ZZF3 427 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 RRHO14718 337 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 PTP4A3O75365 173 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 TACC1O75410 805 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 PCNAP12004 261 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 C6P13671 934 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 CDH2P19022 906 aaPredicted RBP6.34□□□□□ -1.39
USP54-206ENST00000433394 GABRB2P47870 512 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 CLK3P49761 638 aaKnown RBP6.34□□□□□ -1.39
USP54-206ENST00000433394 CLCNKBP51801 687 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 CYP4A11Q02928 519 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 CALD1Q05682 793 aaKnown RBP6.34□□□□□ -1.39
USP54-206ENST00000433394 SEMA3AQ14563 771 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 HIST2H2ACQ16777 129 aaPredicted RBP6.34□□□□□ -1.39
USP54-206ENST00000433394 ZXDCQ2QGD7 858 aaPredicted RBP6.34□□□□□ -1.39
USP54-206ENST00000433394 FCRLBQ6BAA4 426 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 WDR5BQ86VZ2 330 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 TAGAPQ8N103 731 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 AMER2Q8N7J2 671 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 FRMD1Q8N878 549 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 CADM4Q8NFZ8 388 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 NEK9Q8TD19 979 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 GDPD5Q8WTR4 605 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 IP6K1Q92551 441 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 NELL1Q92832 810 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 ARHGEF2Q92974 986 aaKnown RBP6.34□□□□□ -1.39
USP54-206ENST00000433394 RSRC1Q96IZ7 334 aaKnown RBP6.34□□□□□ -1.39
USP54-206ENST00000433394 CLMNQ96JQ2 1002 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 PIP5K1AQ99755 562 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 NCAPGQ9BPX3 1015 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 FTOQ9C0B1 505 aaKnown RBP eCLIP6.34□□□□□ -1.39
USP54-206ENST00000433394 GHITMQ9H3K2 345 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 KAT14Q9H8E8 782 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 BRF2Q9HAW0 419 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 ATP8A2Q9NTI2 1148 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 CDH22Q9UJ99 828 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 ADAM21Q9UKJ8 722 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 PIAS3Q9Y6X2 628 aa6.34□□□□□ -1.39
USP54-206ENST00000433394 PTGES3LE9PB15 166 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 TMCC2O75069 709 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 DDAH2O95865 285 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 CD72P21854 359 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 PTGER1P34995 402 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 INHBCP55103 352 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 ELLP55199 621 aaPredicted RBP6.33□□□□□ -1.4
USP54-206ENST00000433394 OLR1P78380 273 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 PMPCAQ10713 525 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 RUNX2Q13950 521 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 TMEM119Q4V9L6 283 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 ZNF667Q5HYK9 610 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 STRIP1Q5VSL9 837 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 IGFL4Q6B9Z1 124 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 ISM2Q6H9L7 571 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 NCAPH2Q6IBW4 605 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 MIS18BP1Q6P0N0 1132 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 CPLX2Q6PUV4 134 aaKnown RBP6.33□□□□□ -1.4
USP54-206ENST00000433394 SARM1Q6SZW1 724 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 CYP20A1Q6UW02 462 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 OLFML1Q6UWY5 402 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 C17orf99Q6UX52 265 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 GPAT4Q86UL3 456 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 TTC39CQ8N584 583 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 PLD5Q8N7P1 536 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 OTULINQ96BN8 352 aa6.33□□□□□ -1.4
USP54-206ENST00000433394 INTS12Q96CB8 462 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms