RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 NINJ2Q9NZG7 142 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 RSPH14Q9UHP6 348 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 CDH7Q9ULB5 785 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 HPCAL4Q9UM19 191 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 SHOC2Q9UQ13 582 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 TTLL3Q9Y4R7 772 aa9.05□□□□□ -0.96
SMC6-204ENST00000428868 GRXCR2A6NFK2 248 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 CBX4O00257 560 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 MAP2K7O14733 419 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 KDELR3O43731 214 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 CACNG3O60359 315 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 STK10O94804 968 aaKnown RBP9.04□□□□□ -0.96
SMC6-204ENST00000428868 MT-CO1P00395 513 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 MMP2P08253 660 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 TYRP14679 529 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 HOXB8P17481 243 aaPredicted RBP9.04□□□□□ -0.96
SMC6-204ENST00000428868 TPSB2P20231 275 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 HLA-FP30511 346 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 GBP2P32456 591 aaPredicted RBP9.04□□□□□ -0.96
SMC6-204ENST00000428868 ACTN2P35609 894 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 HSD17B3P37058 310 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 FDFT1P37268 417 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 MMP13P45452 471 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 OXCT1P55809 520 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 ZNF33AQ06730 810 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 TNK2Q07912 1038 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 CDH18Q13634 790 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 GRM2Q14416 872 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 LBRQ14739 615 aaKnown RBP9.04□□□□□ -0.96
SMC6-204ENST00000428868 DHCR24Q15392 516 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 CYTH1Q15438 398 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 TPSAB1Q15661 275 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 CCDC85BQ15834 202 aaPredicted RBP9.04□□□□□ -0.96
SMC6-204ENST00000428868 PARP6Q2NL67 630 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 ANO4Q32M45 955 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 FUT11Q495W5 492 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 KCTD11Q693B1 232 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 TIGD7Q6NT04 549 aaPredicted RBP9.04□□□□□ -0.96
SMC6-204ENST00000428868 PARM1Q6UWI2 310 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 MICALCLQ6ZW33 695 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 PRPF39Q86UA1 669 aaKnown RBP9.04□□□□□ -0.96
SMC6-204ENST00000428868 HOOK3Q86VS8 718 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 RNF135Q8IUD6 432 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 ANKMY2Q8IV38 441 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 KLHDC8BQ8IXV7 354 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 ADGRG2Q8IZP9 1017 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 MREGQ8N565 214 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 TEX26Q8N6G2 289 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 BBOF1Q8ND07 529 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 OR2W6PQ8NHA6 318 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 TTC8Q8TAM2 541 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 BPIFB1Q8TDL5 484 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 OSCP1Q8WVF1 389 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 FGF14Q92915 247 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 EXOC2Q96KP1 924 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 C9orf72Q96LT7 481 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 SERPINB12Q96P63 405 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 RBM15Q96T37 977 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMC6-204ENST00000428868 APOL2Q9BQE5 337 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 FEM1AQ9BSK4 669 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 BBS2Q9BXC9 721 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 EBF3Q9H4W6 596 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 SAYSD1Q9NPB0 183 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 DUS2Q9NX74 493 aaKnown RBP9.04□□□□□ -0.96
SMC6-204ENST00000428868 MTRF1LQ9UGC7 380 aaKnown RBP9.04□□□□□ -0.96
SMC6-204ENST00000428868 VPS51Q9UID3 782 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 ZMYM5Q9UJ78 669 aa9.04□□□□□ -0.96
SMC6-204ENST00000428868 TYW5A2RUC4 315 aaKnown RBP9.03□□□□□ -0.96
SMC6-204ENST00000428868 ANTXRLA6NF34 631 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 E7ESA3 106 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 K7ERQ8 282 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 MTSS1O43312 755 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 SMAD6O43541 496 aaKnown RBP9.03□□□□□ -0.96
SMC6-204ENST00000428868 SHBGP04278 402 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 IFNAR2P48551 515 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 STK19P49842 368 aaPredicted RBP9.03□□□□□ -0.96
SMC6-204ENST00000428868 PMS2P54278 862 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 CRADDP78560 199 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 CAV1Q03135 178 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 PDIA2Q13087 525 aaKnown RBP9.03□□□□□ -0.96
SMC6-204ENST00000428868 HNRNPDQ14103 355 aaKnown RBP9.03□□□□□ -0.96
SMC6-204ENST00000428868 HIF1AQ16665 826 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 KYNUQ16719 465 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 PLEKHG6Q3KR16 790 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 BBS9Q3SYG4 887 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 PITRM1Q5JRX3 1037 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 ATAT1Q5SQI0 421 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 TMCO4Q5TGY1 634 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 TMEM215Q68D42 235 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 ITPRIPL1Q6GPH6 555 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 CES5AQ6NT32 575 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 KDELC1Q6UW63 502 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 CAPN12Q6ZSI9 719 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 PCGF5Q86SE9 256 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 SFTPA1Q8IWL2 248 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 SMRP1Q8NCR6 262 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 FIBINQ8TAL6 211 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 ARRDC2Q8TBH0 407 aa9.03□□□□□ -0.96
SMC6-204ENST00000428868 UBLCP1Q8WVY7 318 aaPredicted RBP9.03□□□□□ -0.96
SMC6-204ENST00000428868 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.03□□□□□ -0.961e-8■■■□□ 15.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms