RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 BAG2O95816 211 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 JCHAINP01591 159 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 OR4Q2P0C623 313 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 ODC1P11926 461 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 PGGT1BP53609 377 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 FAM189BP81408 668 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 USP4Q13107 963 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 NAB1Q13506 487 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 BLMHQ13867 455 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 IKBKEQ14164 716 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 ARL13BQ3SXY8 428 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 DNAL1Q4LDG9 190 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 GRTP1Q5TC63 336 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 FSTL4Q6MZW2 842 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 RWDD4Q6NW29 188 aaKnown RBP10.86□□□□□ -0.67
CUX1-205ENST00000425244 OTOP2Q7RTS6 562 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 MAVSQ7Z434 540 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 SHKBP1Q8TBC3 707 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 RSPH1Q8WYR4 309 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 TRIM43Q96BQ3 446 aaPredicted RBP10.86□□□□□ -0.67
CUX1-205ENST00000425244 SPDL1Q96EA4 605 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 TKTL2Q9H0I9 626 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 CHRAC1Q9NRG0 131 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 IARS2Q9NSE4 1012 aaKnown RBP10.86□□□□□ -0.67
CUX1-205ENST00000425244 SLC7A8Q9UHI5 535 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 TTC3P53804 2025 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 NUP205Q92621 2012 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 SF3B1O75533 1304 aaKnown RBP eCLIP10.86□□□□□ -0.674e-6■■■■■ 58.5
CUX1-205ENST00000425244 A0A096LPK6 155 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 CEP290O15078 2479 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 MAGEC1O60732 1142 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 FBXO21O94952 628 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 LTFP02788 710 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 SRGAP2BP0DMP2 458 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 SPRP35270 261 aaPredicted RBP10.86□□□□□ -0.67
CUX1-205ENST00000425244 SERPINB8P50452 374 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 ABCE1P61221 599 aaKnown RBP10.86□□□□□ -0.67
CUX1-205ENST00000425244 PEX6Q13608 980 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 RBBP5Q15291 538 aaKnown RBP10.86□□□□□ -0.67
CUX1-205ENST00000425244 ANKRD20A4Q4UJ75 823 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 CFAP157Q5JU67 520 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 STXBP5Q5T5C0 1151 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 CAPRIN2Q6IMN6 1127 aaKnown RBP10.86□□□□□ -0.67
CUX1-205ENST00000425244 ANO7Q6IWH7 933 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 PPFIBP2Q8ND30 876 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 ZMIZ2Q8NF64 920 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 SORT1Q99523 831 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 TTC1Q99614 292 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 RBBP8Q99708 897 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 MLPHQ9BV36 600 aaPredicted RBP10.86□□□□□ -0.67
CUX1-205ENST00000425244 COLEC11Q9BWP8 271 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 WDCPQ9H6R7 721 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 CYP4F11Q9HBI6 524 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 STX18Q9P2W9 335 aaKnown RBP10.86□□□□□ -0.67
CUX1-205ENST00000425244 OR12D3Q9UGF7 316 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 FBXW11Q9UKB1 542 aa10.86□□□□□ -0.67
CUX1-205ENST00000425244 LOC100653049A0A140TA62 436 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 GABRDO14764 452 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 SIN3BO75182 1162 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 KRT34O76011 436 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 TM7SF2O76062 418 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 SNUPNO95149 360 aaKnown RBP10.85□□□□□ -0.67
CUX1-205ENST00000425244 HSPA4LO95757 839 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 GRK2P25098 689 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 CD68P34810 354 aaPredicted RBP10.85□□□□□ -0.67
CUX1-205ENST00000425244 IDH3AP50213 366 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 RAP1GDS1P52306 607 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 EPHB1P54762 984 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 ARPP19P56211 112 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 TUBB3Q13509 450 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 SPOUT1Q5T280 376 aaKnown RBP10.85□□□□□ -0.67
CUX1-205ENST00000425244 OVOS1Q6IE37 1185 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 DCLRE1AQ6PJP8 1040 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 RAPH1Q70E73 1250 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 BNIPLQ7Z465 357 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 METTL23Q86XA0 190 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 COLGALT2Q8IYK4 626 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 ACVR1CQ8NER5 493 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 CCDC124Q96CT7 223 aaKnown RBP10.85□□□□□ -0.67
CUX1-205ENST00000425244 MOCOSQ96EN8 888 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 PPP1R36Q96LQ0 422 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 CASD1Q96PB1 797 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 PANX3Q96QZ0 392 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 EPAS1Q99814 870 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 MCOLN1Q9GZU1 580 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 SIK2Q9H0K1 926 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 MAN1C1Q9NR34 630 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 SLC39A10Q9ULF5 831 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 PLA2G4CQ9UP65 541 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 DFFAO00273 331 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 MAP3K7O43318 606 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 SMNDC1O75940 238 aaKnown RBP eCLIP10.85□□□□□ -0.671e-5■■□□□ 11.9
CUX1-205ENST00000425244 LRIG2O94898 1065 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 FAM163BP0C2L3 166 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 ACADSP16219 412 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 LHX1P48742 406 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 LIMK2P53671 638 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 CDK18Q07002 472 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 PPIDQ08752 370 aaKnown RBP10.85□□□□□ -0.67
CUX1-205ENST00000425244 MPP3Q13368 585 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms