RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CLEC4CQ8WTT0 213 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 CCDC126Q96EE4 140 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 TNIP3Q96KP6 325 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 DUSP16Q9BY84 665 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 MRPL1Q9BYD6 325 aaKnown RBP15.46■□□□□ 0.06
C9orf3-204ENST00000424143 MAGEB5Q9BZ81 275 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 WDR55Q9H6Y2 383 aaPredicted RBP15.46■□□□□ 0.06
C9orf3-204ENST00000424143 COPS7BQ9H9Q2 264 aaPredicted RBP15.46■□□□□ 0.06
C9orf3-204ENST00000424143 ZDHHC2Q9UIJ5 367 aa15.46■□□□□ 0.06
C9orf3-204ENST00000424143 PTBP2Q9UKA9 531 aaKnown RBP15.46■□□□□ 0.06
C9orf3-204ENST00000424143 UBQLN1Q9UMX0 589 aaKnown RBP15.46■□□□□ 0.06
C9orf3-204ENST00000424143 PDCD11Q14690 1871 aaKnown RBP15.46■□□□□ 0.06
C9orf3-204ENST00000424143 ZNF236Q9UL36 1845 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 TCRBV3S1A0A5B6 114 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 FZD9O00144 591 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 TRMUO75648 421 aaKnown RBP15.45■□□□□ 0.06
C9orf3-204ENST00000424143 CHRNGP07510 517 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 SPATA31D3P0C874 917 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 TXNP10599 105 aaKnown RBP15.45■□□□□ 0.06
C9orf3-204ENST00000424143 CDK4P11802 303 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 LCP1P13796 627 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 CDH2P19022 906 aaPredicted RBP15.45■□□□□ 0.06
C9orf3-204ENST00000424143 SLC7A1P30825 629 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 ADRA1BP35368 520 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 GNL1P36915 607 aaPredicted RBP15.45■□□□□ 0.06
C9orf3-204ENST00000424143 IRF9Q00978 393 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 GALNT2Q10471 571 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 CDH17Q12864 832 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 PRPSAP1Q14558 356 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 TREML2Q5T2D2 321 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 ZNF772Q68DY9 489 aaPredicted RBP15.45■□□□□ 0.06
C9orf3-204ENST00000424143 NAPEPLDQ6IQ20 393 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 SPATA31D4Q6ZUB0 917 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 FAM131BQ86XD5 332 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 AFAP1L2Q8N4X5 818 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 EFCAB3Q8N7B9 438 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 ADAMTS16Q8TE57 1224 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 SLC16A10Q8TF71 515 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 DPF3Q92784 378 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 ZNF560Q96MR9 790 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 GPR78Q96P69 363 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 AGAP2Q99490 1192 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 EFHD1Q9BUP0 239 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 OCEL1Q9H607 264 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 TASP1Q9H6P5 420 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 C20orf96Q9NUD7 363 aaPredicted RBP15.45■□□□□ 0.06
C9orf3-204ENST00000424143 AP4S1Q9Y587 144 aa15.45■□□□□ 0.06
C9orf3-204ENST00000424143 COPG1Q9Y678 874 aaKnown RBP15.45■□□□□ 0.06
C9orf3-204ENST00000424143 PAPPA2Q9BXP8 1791 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 A0A087X1B8 175 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 RBM47A0AV96 593 aaKnown RBP15.44■□□□□ 0.06
C9orf3-204ENST00000424143 ASB14A6NK59 587 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 TRIM24O15164 1050 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 XPOTO43592 962 aaKnown RBP15.44■□□□□ 0.06
C9orf3-204ENST00000424143 VAPBO95292 243 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 BMP10O95393 424 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 H6PDO95479 791 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 FAM200BP0CF97 657 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 WARSP23381 471 aaKnown RBP15.44■□□□□ 0.06
C9orf3-204ENST00000424143 EPHA3P29320 983 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 DPP6P42658 865 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 INHBCP55103 352 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 PSME3P61289 254 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 CDKL1Q00532 357 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 ARHGAP1Q07960 439 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 SQLEQ14534 574 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 XKR4Q5GH76 650 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 PPM1LQ5SGD2 360 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 FAM182AQ5T1J6 154 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 LRRC8EQ6NSJ5 796 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 FAM45BPQ6NSW5 357 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 CES3Q6UWW8 571 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 ANKFN1Q8N957 763 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 FAM45AQ8TCE6 357 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 ZNF668Q96K58 619 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-204ENST00000424143 CNBD2Q96M20 576 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 TEKT5Q96M29 485 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 MRPL57Q9BQC6 102 aaKnown RBP15.44■□□□□ 0.06
C9orf3-204ENST00000424143 MLPHQ9BV36 600 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-204ENST00000424143 ZCWPW1Q9H0M4 648 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 VPS45Q9NRW7 570 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 PNPLA3Q9NST1 481 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 ZNHIT2Q9UHR6 403 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 AKT3Q9Y243 479 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 ACOT9Q9Y305 439 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 NR2E3Q9Y5X4 410 aa15.44■□□□□ 0.06
C9orf3-204ENST00000424143 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 H3BNH8 94 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 SDHDO14521 159 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 DLX3O60479 287 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 USP2O75604 605 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 RNASEH2AO75792 299 aaKnown RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 LGALS2P05162 132 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 SLC35E2BP0CK96 405 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 C7P10643 843 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 CD68P34810 354 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 IKBKEQ14164 716 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 PTK2BQ14289 1009 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 GRM3Q14832 879 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 MYBPC3Q14896 1274 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms