RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 TNFAIP8O95379 198 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 MBTD1Q05BQ5 628 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 DBN1Q16643 649 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 SOWAHAQ2M3V2 549 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 TRIM74Q86UV6 250 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 TRIM73Q86UV7 250 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 FAM131BQ86XD5 332 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 PXYLP1Q8TE99 480 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 FERMT1Q9BQL6 677 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 MRPL45Q9BRJ2 306 aaKnown RBP14.58□□□□□ -0.07
MSH5-206ENST00000423982 SLC4A5Q9BY07 1137 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 MRPS26Q9BYN8 205 aaKnown RBP14.58□□□□□ -0.07
MSH5-206ENST00000423982 GCOM2Q9BZD3 368 aaPredicted RBP14.58□□□□□ -0.07
MSH5-206ENST00000423982 PCDH10Q9P2E7 1040 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 RAB26Q9ULW5 256 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 SNX9Q9Y5X1 595 aa14.58□□□□□ -0.07
MSH5-206ENST00000423982 SCN1AP35498 2009 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 C7orf72A4D263 438 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 TMEM233B4DJY2 109 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 KCNK1O00180 336 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 PPEF2O14830 753 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 FAM58BPP0C7Q3 252 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 GP5P40197 560 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 EMP3P54852 163 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 TMED1Q13445 227 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 DPYSL2Q16555 572 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 SLC10A6Q3KNW5 377 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 HSP90AA5PQ58FG0 334 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 DUS1LQ6P1R4 473 aaKnown RBP14.58□□□□□ -0.08
MSH5-206ENST00000423982 EXOC8Q8IYI6 725 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.58□□□□□ -0.08
MSH5-206ENST00000423982 CCNYQ8ND76 341 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 TMEM40Q8WWA1 233 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 GAB3Q8WWW8 586 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 ATP6V1E2Q96A05 226 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 ZNF669Q96BR6 464 aaPredicted RBP14.58□□□□□ -0.08
MSH5-206ENST00000423982 P2RY11Q96G91 374 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 DEFB118Q96PH6 123 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 APOL2Q9BQE5 337 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 FZD8Q9H461 694 aa14.58□□□□□ -0.08
MSH5-206ENST00000423982 TRMT13Q9NUP7 481 aaKnown RBP14.58□□□□□ -0.08
MSH5-206ENST00000423982 RRN3P2A6NIE6 340 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 DPYSL4O14531 572 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 XPO1O14980 1071 aaKnown RBP14.57□□□□□ -0.08
MSH5-206ENST00000423982 LCP1P13796 627 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 ACAT1P24752 427 aaKnown RBP14.57□□□□□ -0.08
MSH5-206ENST00000423982 PITX1P78337 314 aaPredicted RBP14.57□□□□□ -0.08
MSH5-206ENST00000423982 APOFQ13790 326 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 ARHGEF6Q15052 776 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 TMEM259Q4ZIN3 620 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 IL23RQ5VWK5 629 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 RNF180Q86T96 592 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 ZNF410Q86VK4 478 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 AHI1Q8N157 1196 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 LINC01465Q8N7H1 131 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 SNX31Q8N9S9 440 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 RIN3Q8TB24 985 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 MFSD3Q96ES6 412 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 ZNF696Q9H7X3 374 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 ZDHHC2Q9UIJ5 367 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 DMTF1Q9Y222 760 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 CEPT1Q9Y6K0 416 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 COL1A2P08123 1366 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 RGSL1A5PLK6 1076 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 C2P06681 752 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 THRAP10827 490 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 CYLC2Q14093 348 aaPredicted RBP14.57□□□□□ -0.08
MSH5-206ENST00000423982 CYS1Q717R9 158 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 SPATA6LQ8N4H0 392 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 HSPBAP1Q96EW2 488 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 TBCBQ99426 244 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 NT5C1AQ9BXI3 368 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 PCDHAC1Q9H158 963 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 DPEP3Q9H4B8 488 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 Q9H521 79 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 WDR41Q9HAD4 459 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 RNF11Q9Y3C5 154 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 CROCCQ5TZA2 2017 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 PIGNO95427 931 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 CDH2P19022 906 aaPredicted RBP14.57□□□□□ -0.08
MSH5-206ENST00000423982 PRDX6P30041 224 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 AVPR1AP37288 418 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 ACLYP53396 1101 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 RPL26P61254 145 aaKnown RBP14.57□□□□□ -0.08
MSH5-206ENST00000423982 COG7P83436 770 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 INSCQ1MX18 579 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 ARL13AQ5H913 290 aaPredicted RBP14.57□□□□□ -0.08
MSH5-206ENST00000423982 LHX8Q68G74 356 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 ZNF567Q8N184 647 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 PCDH20Q8N6Y1 951 aaKnown RBP14.57□□□□□ -0.08
MSH5-206ENST00000423982 RBBP8Q99708 897 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 RNF208Q9H0X6 261 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 FAM96AQ9H5X1 160 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 SUDS3Q9H7L9 328 aaPredicted RBP14.57□□□□□ -0.08
MSH5-206ENST00000423982 CHCHD3Q9NX63 227 aaKnown RBP14.57□□□□□ -0.08
MSH5-206ENST00000423982 NOD1Q9Y239 953 aa14.57□□□□□ -0.08
MSH5-206ENST00000423982 MATN2O00339 956 aa14.56□□□□□ -0.08
MSH5-206ENST00000423982 PHGDHO43175 533 aaKnown RBP14.56□□□□□ -0.08
MSH5-206ENST00000423982 GRID2O43424 1007 aa14.56□□□□□ -0.08
MSH5-206ENST00000423982 TRIM13O60858 407 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms