RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 ITGA2BP08514 1039 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 CCR1P32246 355 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 FMO5P49326 533 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 MTA1Q13330 715 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 AUHQ13825 339 aaKnown RBP17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 FGL2Q14314 439 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 MEA1Q16626 185 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 OR6B2Q6IFH4 312 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 PTAR1Q7Z6K3 402 aaPredicted RBP17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 PARGQ86W56 976 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 PPM1KQ8N3J5 372 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 LMO3Q8TAP4 145 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 DYRK4Q9NR20 520 aa17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 ARMCX3Q9UH62 379 aaPredicted RBP17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 ATXN7L1Q9ULK2 861 aaPredicted RBP17.13■□□□□ 0.33
CHCHD3-202ENST00000423635 CCDC187A0A096LP49 1063 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 PAK4O96013 591 aaPredicted RBP17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 ITGB6P18564 788 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 PRCPP42785 496 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 RABIFP47224 123 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 IRAK1P51617 712 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 RPS21P63220 83 aaKnown RBP17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 KRT83P78385 493 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 CENPCQ03188 943 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 NR0B2Q15466 257 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 KIF26BQ2KJY2 2108 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 COBLL1Q53SF7 1204 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 COLEC12Q5KU26 742 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 PERM1Q5SV97 790 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 ANKRD40Q6AI12 368 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 KIAA1161Q6NSJ0 714 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 LURAP1LQ8IV03 231 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 ATP11CQ8NB49 1132 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 FEM1CQ96JP0 617 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 LENG8Q96PV6 779 aaPredicted RBP17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 PSMB7Q99436 277 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 BOCQ9BWV1 1114 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 METTL14Q9HCE5 456 aaKnown RBP17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 CNTN6Q9UQ52 1028 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 PCDHGA7Q9Y5G6 932 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 TRPM6Q9BX84 2022 aa17.12■□□□□ 0.33
CHCHD3-202ENST00000423635 RP1P56715 2156 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 E5RJQ4 531 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 K7ERQ8 282 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 GJB6O95452 261 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 ITGB2P05107 769 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 CLCN6P51797 869 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 PDX1P52945 283 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 CDH4P55283 916 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 CDK17Q00537 523 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 GCNT1Q02742 428 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 PKP1Q13835 747 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 DEFB133Q30KQ1 61 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 ARSIQ5FYB1 569 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 DENND1BQ6P3S1 775 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 FOXR1Q6PIV2 292 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 ATG14Q6ZNE5 492 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 CHST14Q8NCH0 376 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 BTN2A2Q8WVV5 523 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 LIN37Q96GY3 246 aaPredicted RBP17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 KLF6Q99612 283 aaPredicted RBP17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 IL12RB2Q99665 862 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 SEMA3CQ99985 751 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 TRIM4Q9C037 500 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 ACSL6Q9UKU0 697 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 VANGL2Q9ULK5 521 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 HS3ST4Q9Y661 456 aa17.11■□□□□ 0.33
CHCHD3-202ENST00000423635 NTN3O00634 580 aaPredicted RBP17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 RAD51BO15315 384 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 SPINT1O43278 529 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 SUV39H1O43463 412 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 SMAD6O43541 496 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 NOBOXO60393 691 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 GLI1P08151 1106 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 JUNDP17535 347 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 RPIAP49247 311 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 PMS1P54277 932 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 INHBCP55103 352 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 TAF5Q15542 800 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 CRTC1Q6UUV9 634 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 ZSCAN30Q86W11 494 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 LMX1AQ8TE12 382 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 GLMNQ92990 594 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 NAT6Q93015 286 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 PPP1R16AQ96I34 528 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 SLC2A13Q96QE2 648 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 TSG101Q99816 390 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 C2orf49Q9BVC5 232 aaPredicted RBP17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 MUC3BQ9H195 1237 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 DDIT4Q9NX09 232 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 IL36AQ9UHA7 158 aa17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 IPO11Q9UI26 975 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-202ENST00000423635 MUSKO15146 869 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 P4HA2O15460 535 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 AP1G1O43747 822 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 SNAP91O60641 907 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 LEFTY1O75610 366 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 SFTPCP11686 197 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms