RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 KRT73Q86Y46 540 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 PHACTR4Q8IZ21 702 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 PMF1-BGLAPU3KQ54 211 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 CHADO15335 359 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 TRUB2O95900 331 aaKnown RBP12.19□□□□□ -0.46
UBR4-205ENST00000417040 NR2C2P49116 596 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 GMPSP49915 693 aaPredicted RBP12.19□□□□□ -0.46
UBR4-205ENST00000417040 CDK7P50613 346 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 NDUFA5Q16718 116 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 AKAP14Q86UN6 197 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 MREGQ8N565 214 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 PTGR2Q8N8N7 351 aaPredicted RBP12.19□□□□□ -0.46
UBR4-205ENST00000417040 IKZF4Q9H2S9 585 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 CLK4Q9HAZ1 481 aaKnown RBP12.19□□□□□ -0.46
UBR4-205ENST00000417040 CDH9Q9ULB4 789 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 CLEC4AQ9UMR7 237 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 RARRES1P49788 294 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 SEPHS1P49903 392 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 ARF5P84085 180 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 RALGDSQ12967 914 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 EGFLAMQ63HQ2 1017 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 CRISPLD1Q9H336 500 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 SETD4Q9NVD3 440 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 TELO2Q9Y4R8 837 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 ASTN1O14525 1302 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 LRATO95237 230 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 NFKB1P19838 968 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 SLC26A3P40879 764 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 MSLNQ13421 630 aaPredicted RBP12.19□□□□□ -0.46
UBR4-205ENST00000417040 SNAPC2Q13487 334 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 QPRTQ15274 297 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 FBXO47Q5MNV8 452 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 CDC73Q6P1J9 531 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 PAGE2Q7Z2X7 111 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 OFCC1Q8IZS5 231 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 SLC47A1Q96FL8 570 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 YME1L1Q96TA2 773 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 S100A14Q9HCY8 104 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 CATSPERZQ9NTU4 200 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 HBS1LQ9Y450 684 aaKnown RBP12.19□□□□□ -0.46
UBR4-205ENST00000417040 GSC2O15499 205 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 VIL1P09327 827 aaKnown RBP12.19□□□□□ -0.46
UBR4-205ENST00000417040 PPP4CP60510 307 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 ZNF846Q147U1 533 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 TAF1CQ15572 869 aaPredicted RBP12.19□□□□□ -0.46
UBR4-205ENST00000417040 GPRC5AQ8NFJ5 357 aa12.19□□□□□ -0.46
UBR4-205ENST00000417040 SCAMP3O14828 347 aaKnown RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 PAPSS1O43252 624 aaPredicted RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 UMPSP11172 480 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 PRKAG1P54619 331 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 AMPD2Q01433 879 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 VWA5B1Q5TIE3 1220 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 MZT2BQ6NZ67 158 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 RFWD3Q6PCD5 774 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 SPPL2CQ8IUH8 684 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 FAM47BQ8NA70 645 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 WDR55Q9H6Y2 383 aaPredicted RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 PNPLA3Q9NST1 481 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 VAV3Q9UKW4 847 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 ITGA11Q9UKX5 1188 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 DNM1LO00429 736 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 TSPAN9O75954 239 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 PABPC1P11940 636 aaKnown RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 TYMPP19971 482 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 CYP2A7P20853 494 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 SP100P23497 879 aaPredicted RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 CD86P42081 329 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 CPT1AP50416 773 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 PRKAA2P54646 552 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 NRG1Q02297 640 aaPredicted RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 DOK6Q6PKX4 331 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 SYTL5Q8TDW5 730 aaPredicted RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 FZD1Q9UP38 647 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 KLRC4O43908 158 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 LTA4HP09960 611 aaKnown RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 CTBP1Q13363 440 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 IL18R1Q13478 541 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 CACUL1Q86Y37 369 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 PRRG3Q9BZD7 231 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 SNCAIPQ9Y6H5 919 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 SETBP1Q9Y6X0 1596 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 KHDRBS3O75525 346 aaKnown RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 ALDH1A2O94788 518 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 FBXO21O94952 628 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 THP07101 528 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 PUDPQ08623 228 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 TOP3AQ13472 1001 aaPredicted RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 SKIV2LQ15477 1246 aaKnown RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 MED22Q15528 200 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 PPP1R26Q5T8A7 1209 aaPredicted RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 CDK20Q8IZL9 346 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 VPS35Q96QK1 796 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 CDH19Q9H159 772 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 ZC3H13Q5T200 1668 aaKnown RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 TMCC2O75069 709 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 VPS4BO75351 444 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 PSIP1O75475 530 aaKnown RBP12.18□□□□□ -0.46
UBR4-205ENST00000417040 TBX4P57082 545 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 TAB1Q15750 504 aa12.18□□□□□ -0.46
UBR4-205ENST00000417040 ZNF772Q68DY9 489 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms